Miyakogusa Predicted Gene
- Lj2g3v1368240.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1368240.2 Non Chatacterized Hit- tr|C4JA88|C4JA88_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,69.49,1e-17,Sterile
alpha motif.,Sterile alpha motif domain; SAM_1,Sterile alpha motif,
type 1; SUBFAMILY NOT NA,CUFF.36853.2
(1020 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58837 similar to UniRef100_A7Q2J7 Cluster: Chromosome... 1965 0.0
gnl|LJGI|TC73577 472 e-132
gnl|LJGI|FS321794 similar to UniRef100_A7PD69 Cluster: Chromosom... 222 3e-57
gnl|LJGI|BP052806 homologue to UniRef100_A7PMG3 Cluster: Chromos... 202 3e-51
>gnl|LJGI|TC58837 similar to UniRef100_A7Q2J7 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 1626
Score = 1965 bits (991), Expect = 0.0
Identities = 1011/1020 (99%)
Strand = Plus / Plus
Query: 1 atgtctgacacttcgaggggtcgagttaccatcactcttgggcgtagcggtcaggttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atgtctgacacttcgaggggtcgagttaccatcactcttgggcgtagcggtcaggttgtg 354
Query: 61 aagagggatgtgtctggtgctgatgttgctttctcatcttcggtttcctcggctgggtcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aagagggatgtgtctggtgctgatgttgctttctcatcttcggtttcctcggctgggtcg 414
Query: 121 aaacgctctgtaagagacagaattggaagtaatgcagatagttccatgtggcatggaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aaacgctctgtaagagacagaattggaagtaatgcagatagttccatgtggcatggaaat 474
Query: 181 ggcctcgccagtaataaacgacagcgaggagatatgagttcgcgaaatgggttggatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggcctcgccagtaataaacgacagcgaggagatatgagttcgcgaaatgggttggatgat 534
Query: 241 gggcgtattggcaaagatgatctccgattgaagctcatacaaaaaagtgcatctaggcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gggcgtattggcaaagatgatctccgattgaagctcatacaaaaaagtgcatctaggcag 594
Query: 301 gctgagagcaatgacaagaagaggcatggggacctgcgtgaaaaattatcaaaggcagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gctgagagcaatgacaagaagaggcatggggacctgcgtgaaaaattatcaaaggcagtt 654
Query: 361 caacctcctagagacagttttaactcaaagccgcgcatgcctgaaccaagggaaagaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 caacctcctagagacagttttaactcaaagccgcgcatgcctgaaccaagggaaagaagc 714
Query: 421 ttgttaaggcaacttcccccagctagaagctctgatgatttaatgcgtatggaatcaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ttgttaaggcaacttcccccagctagaagctctgatgatttaatgcgtatggaatcaatg 774
Query: 481 agaagctcatactctccttggacattggatcatattcggcaaagatcacctgatgggttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 agaagctcatactctccttggacattggatcatattcggcaaagatcacctgatgggttt 834
Query: 541 ccaagtacttccaggggtatttccccccagagaaatgctggagacctacagagaaggcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ccaagtacttccaggggtatttccccccagagaaatgctggagacctacagagaaggcca 894
Query: 601 ttgaacaggacatatgacagtgccagatcagttccatacgtaggtagggatgttcttgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 ttgaacaggacatatgacagtgccagatcagttccatacgtaggtagggatgttcttgaa 954
Query: 661 acttcaaggcctccaagtactgcacctgcatctttcacgtcacgctccacaatgtcaaca 720
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 955 acttcaaggcctccaagtactgcacctgcatctttcatgtcacgctccacaatgtcaaca 1014
Query: 721 tggcctccagtaactgctaagtctgtagcatctcatcctggccaacttcctccatcgagc 780
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 ttgcctccagtaactgctaagtctgtagcatctcatcctggccaacttcctccatcgagc 1074
Query: 781 agtgttgcaccaagggcttcatatgcgggtgatgaacaccaatcacagcaaactgttgat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 agtgttgcaccaagggcttcatatgcgggtgatgaacaccaatcacagcaaactgttgat 1134
Query: 841 ggcttgttacatgcattgggactaggaaaatatgtcattctcttcaaggctgaggaagtg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 ggcttgttacatgcattgggactaggaaaatatgtcattctcttcaaggctgaggaagtg 1194
Query: 901 gatatgactgcattgaagcaaatgggagaaaatgacctcaaagagcttggaattcctatg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 gatatgactgcattgaagcaaatgggagaaaatgacctcaaagagcttggaattcctatg 1254
Query: 961 ggtccgaggnnnnnnnttctactcgctctcatgcctcgtaccaaacgtccacattgattg 1020
||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 ggtccgaggaaaaaaattctactcgctctcatgcctcgtaccaaacgtccacattgattg 1314
>gnl|LJGI|TC73577
Length = 648
Score = 472 bits (238), Expect = e-132
Identities = 238/238 (100%)
Strand = Plus / Plus
Query: 1 atgtctgacacttcgaggggtcgagttaccatcactcttgggcgtagcggtcaggttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 atgtctgacacttcgaggggtcgagttaccatcactcttgggcgtagcggtcaggttgtg 330
Query: 61 aagagggatgtgtctggtgctgatgttgctttctcatcttcggtttcctcggctgggtcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aagagggatgtgtctggtgctgatgttgctttctcatcttcggtttcctcggctgggtcg 390
Query: 121 aaacgctctgtaagagacagaattggaagtaatgcagatagttccatgtggcatggaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aaacgctctgtaagagacagaattggaagtaatgcagatagttccatgtggcatggaaat 450
Query: 181 ggcctcgccagtaataaacgacagcgaggagatatgagttcgcgaaatgggttggatg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ggcctcgccagtaataaacgacagcgaggagatatgagttcgcgaaatgggttggatg 508
Score = 95.6 bits (48), Expect = 5e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 238 gatgggcgtattggcaaagatgatctccgattgaagctcatacaaaaa 285
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatgggcgtattggcaaagatgatctccgattgaagctcatacaaaaa 648
>gnl|LJGI|FS321794 similar to UniRef100_A7PD69 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 492
Score = 222 bits (112), Expect = 3e-57
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 1 atgtctgacacttcgaggggtcgagttaccatcactcttgggcgtagcggtcaggttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtctgacacttcgaggggtcgagttaccatcactcttgggcgtagcggtcaggttgtg 440
Query: 61 aagagggatgtgtctggtgctgatgttgctttctcatcttcggtttcctcgg 112
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagagggatgtgtctggtgctgatgttgctttctcatcttcggtttcctcgg 492
>gnl|LJGI|BP052806 homologue to UniRef100_A7PMG3 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 468
Score = 202 bits (102), Expect = 3e-51
Identities = 116/123 (94%)
Strand = Plus / Minus
Query: 898 gtggatatgactgcattgaagcaaatgggagaaaatgacctcaaagagcttggaattcct 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gtggatatgactgcattgaagcaaatgggagaaaatgacctcaaagagcttggaattcct 233
Query: 958 atgggtccgaggnnnnnnnttctactcgctctcatgcctcgtaccaaacgtccacattga 1017
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 atgggtccgaggaaaaaaattctactcgctctcatgcctcgtaccaaacgtccacattga 173
Query: 1018 ttg 1020
|||
Sbjct: 172 ttg 170