Miyakogusa Predicted Gene
- Lj2g3v1351570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1351570.1 Non Chatacterized Hit- tr|I1J5H6|I1J5H6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26893
PE,72.98,0,coiled-coil,NULL; HLH,Helix-loop-helix domain; no
description,Helix-loop-helix domain; seg,NULL; BAS,CUFF.36823.1
(735 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81665 similar to UniRef100_A7Q2M2 Cluster: Chromosome... 311 3e-84
gnl|LJGI|TC60285 similar to UniRef100_Q5U8L7 Cluster: BHLH trans... 176 1e-43
gnl|LJGI|TC80652 similar to UniRef100_Q5U8L7 Cluster: BHLH trans... 161 8e-39
gnl|LJGI|GO013212 UniRef100_Q0D801 Cluster: Os07g0193800 protein... 111 6e-24
gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome... 78 9e-14
gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BE... 60 2e-08
gnl|LJGI|AV424133 similar to UniRef100_A8TLW5 Cluster: BHLH tran... 56 3e-07
gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BE... 54 1e-06
gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosom... 52 5e-06
>gnl|LJGI|TC81665 similar to UniRef100_A7Q2M2 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 581
Score = 311 bits (157), Expect = 3e-84
Identities = 157/157 (100%)
Strand = Plus / Plus
Query: 579 agcattggtcctcgatgagataatcaattatattcaatcacttcagcgccaagttgagtt 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcattggtcctcgatgagataatcaattatattcaatcacttcagcgccaagttgagtt 60
Query: 639 cttgtcaatgaagcttgaagcagtaaattcaagactgacccctggcattgaagtgtttcc 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttgtcaatgaagcttgaagcagtaaattcaagactgacccctggcattgaagtgtttcc 120
Query: 699 tcctaaagattttgatcagcaaacatttgatacagcc 735
|||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcctaaagattttgatcagcaaacatttgatacagcc 157
>gnl|LJGI|TC60285 similar to UniRef100_Q5U8L7 Cluster: BHLH transcription factor;
n=1; Gossypium hirsutum|Rep: BHLH transcription factor -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (58%)
Length = 828
Score = 176 bits (89), Expect = 1e-43
Identities = 209/249 (83%)
Strand = Plus / Plus
Query: 424 gagcctcctaagcaagactatatccatgtccgagctagaaggggtcaagctactgatagt 483
||||| ||||||||||||||||| ||||| |||| |||||||| ||||||||||||||
Sbjct: 441 gagccacctaagcaagactatattcatgttagagcaagaagggggcaagctactgatagc 500
Query: 484 cacagtcttgctgaaagagctagaagggaaaagattagtgaaaggatgaaaattcttcag 543
||||| | || || |||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 501 cacagcatagcagagagagctagaagggaaaagatcagtgagaggatgaaaattcttcag 560
Query: 544 gatttagttcctggttgtaataaggttatcgggaaagcattggtcctcgatgagataatc 603
||||| || || || ||||| ||| | || || |||||| | || || |||||||||||
Sbjct: 561 gatttggtccccgggtgtaacaagatgattggtaaagcacttgttctggatgagataatt 620
Query: 604 aattatattcaatcacttcagcgccaagttgagttcttgtcaatgaagcttgaagcagta 663
||||| || || || || |||| || ||||||||| | || |||||||||||||||||
Sbjct: 621 aattacatccagtcgctacagcatcaggttgagttcctatcgatgaagcttgaagcagtt 680
Query: 664 aattcaaga 672
|||||||||
Sbjct: 681 aattcaaga 689
>gnl|LJGI|TC80652 similar to UniRef100_Q5U8L7 Cluster: BHLH transcription factor;
n=1; Gossypium hirsutum|Rep: BHLH transcription factor -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (63%)
Length = 1194
Score = 161 bits (81), Expect = 8e-39
Identities = 207/249 (83%)
Strand = Plus / Plus
Query: 424 gagcctcctaagcaagactatatccatgtccgagctagaaggggtcaagctactgatagt 483
||||| ||||||||||||||||| ||||| | || |||||||| |||||||| |||||
Sbjct: 411 gagccacctaagcaagactatattcatgtgagggcaagaagggggcaagctacagatagc 470
Query: 484 cacagtcttgctgaaagagctagaagggaaaagattagtgaaaggatgaaaattcttcag 543
||||| | || || |||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 471 cacagcatagcagagagagctagaagggaaaagatcagtgagaggatgaaaattcttcag 530
Query: 544 gatttagttcctggttgtaataaggttatcgggaaagcattggtcctcgatgagataatc 603
||||| || || || ||||| ||| | || || |||||| | || || |||||||||||
Sbjct: 531 gatttggtccccgggtgtaacaagatgattggtaaagcacttgttctggatgagataatt 590
Query: 604 aattatattcaatcacttcagcgccaagttgagttcttgtcaatgaagcttgaagcagta 663
||||| || || || || |||| || ||||||||| | || |||||||||||||||||
Sbjct: 591 aattacatccagtcgctgcagcatcaggttgagttcctatcgatgaagcttgaagcagtt 650
Query: 664 aattcaaga 672
|||||||||
Sbjct: 651 aattcaaga 659
>gnl|LJGI|GO013212 UniRef100_Q0D801 Cluster: Os07g0193800 protein; n=1; Oryza sativa
Japonica Group|Rep: Os07g0193800 protein - Oryza sativa
subsp. japonica (Rice), partial (15%)
Length = 637
Score = 111 bits (56), Expect = 6e-24
Identities = 110/128 (85%)
Strand = Plus / Plus
Query: 430 cctaagcaagactatatccatgtccgagctagaaggggtcaagctactgatagtcacagt 489
|||||||||||||| || || ||| |||| |||||||| ||||| || ||||||||||||
Sbjct: 504 cctaagcaagactacatacacgtcagagccagaaggggacaagccaccgatagtcacagt 563
Query: 490 cttgctgaaagagctagaagggaaaagattagtgaaaggatgaaaattcttcaggattta 549
|| ||||| ||||| ||||| |||||||| ||||| || ||||| |||||||| ||||||
Sbjct: 564 ctcgctgagagagccagaagagaaaagatcagtgagagaatgaagattcttcaagattta 623
Query: 550 gttcctgg 557
|| |||||
Sbjct: 624 gtccctgg 631
>gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome chr5 scaffold_58,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_58, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1046
Score = 77.8 bits (39), Expect = 9e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 455 gagctagaaggggtcaagctactgatagtcacagtcttgctgaaagagctagaagggaaa 514
|||| ||||| ||||||||||||||||| || |||||||| ||||||| | ||||||| |
Sbjct: 70 gagcaagaagaggtcaagctactgatagccatagtcttgcggaaagagttcgaagggaga 129
Query: 515 agattagtgaaaggatgaa 533
| || ||||||||||||||
Sbjct: 130 aaatcagtgaaaggatgaa 148
>gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BEE 3; n=1;
Arabidopsis thaliana|Rep: Protein BEE 3 - Arabidopsis
thaliana (Mouse-ear cress), partial (41%)
Length = 1161
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 448 catgtccgagctagaaggggtcaagctactgatagtcacagt 489
|||||| |||| ||||| ||||||||||||||||||||||||
Sbjct: 506 catgtcagagccagaagaggtcaagctactgatagtcacagt 547
>gnl|LJGI|AV424133 similar to UniRef100_A8TLW5 Cluster: BHLH transcription factor
Upa20; n=1; Capsicum annuum|Rep: BHLH transcription
factor Upa20 - Capsicum annuum (Bell pepper), partial
(19%)
Length = 307
Score = 56.0 bits (28), Expect = 3e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 592 gatgagataatcaattatattcaatcacttcagcgccaagttgagttcttgtcaatgaag 651
||||| |||||||||||| |||| ||| | ||| ||||| ||||||||||||||||||
Sbjct: 72 gatgaaataatcaattatgttcagtcattacagaatcaagtggagttcttgtcaatgaag 131
Query: 652 cttg 655
||||
Sbjct: 132 cttg 135
>gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BEE 1; n=1;
Arabidopsis thaliana|Rep: Protein BEE 1 - Arabidopsis
thaliana (Mouse-ear cress), partial (39%)
Length = 998
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 455 gagctagaaggggtcaagctactgatagtcacagt 489
|||| ||||| ||||||||||||||||||||||||
Sbjct: 508 gagccagaagaggtcaagctactgatagtcacagt 542
>gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 526
Score = 52.0 bits (26), Expect = 5e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 464 ggggtcaagctactgatagtcacagtcttgctgaaagagctagaagggaaaagattagtg 523
|||||||||| || |||||||||| ||||| || |||| || ||||||||||| ||||
Sbjct: 129 ggggtcaagcaacaaatagtcacagccttgcagagagagtgaggagggaaaagataagtg 188
Query: 524 aaaggatgaa 533
| ||||||||
Sbjct: 189 agaggatgaa 198