Miyakogusa Predicted Gene
- Lj2g3v1349350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1349350.1 tr|I1N197|I1N197_SOYBN Thioredoxin OS=Glycine max
GN=Gma.5662 PE=3 SV=1,74.79,0,SUBFAMILY NOT NAMED,NULL;
THIOREDOXIN-RELATED,Thioredoxin; Thioredoxin-like,Thioredoxin-like
fold; T,CUFF.36789.1
(492 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS324055 299 8e-81
gnl|LJGI|TC65281 weakly similar to UniRef100_A7Q2Q0 Cluster: Chr... 178 2e-44
gnl|LJGI|TC65208 weakly similar to UniRef100_Q5ZF46 Cluster: Thi... 155 3e-37
>gnl|LJGI|FS324055
Length = 260
Score = 299 bits (151), Expect = 8e-81
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 1 atgggatccaacatgtttaattttgcaaatgttgatagatcatcagactcaaccaacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atgggatccaacatgtttaattttgcaaatgttgatagatcatcagactcaaccaacatc 169
Query: 61 atcaccttccattccactgctaaatggaatgctcattttgatgccttcaaacaaactgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atcaccttccattccactgctaaatggaatgctcattttgatgccttcaaacaaactgac 229
Query: 121 aagctgatggtgattgatttcacagctaaat 151
|||||||||||||||||||||||||||||||
Sbjct: 230 aagctgatggtgattgatttcacagctaaat 260
>gnl|LJGI|TC65281 weakly similar to UniRef100_A7Q2Q0 Cluster: Chromosome chr1
scaffold_46, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_46, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (89%)
Length = 623
Score = 178 bits (90), Expect = 2e-44
Identities = 156/178 (87%)
Strand = Plus / Plus
Query: 62 tcaccttccattccactgctaaatggaatgctcattttgatgccttcaaacaaactgaca 121
|||||||||||||||||||||||||||| ||||| |||||||||| |||| |||| |||
Sbjct: 147 tcaccttccattccactgctaaatggaaggctcactttgatgcctccaaagaaacaaaca 206
Query: 122 agctgatggtgattgatttcacagctaaatggtgtggaccctgcaaactcatggacccag 181
|||||||||| ||||| ||||| ||||| |||||||| || |||||| |||||| |||
Sbjct: 207 agctgatggttattgacttcacggctaactggtgtgggccttgcaaatacatggatccaa 266
Query: 182 ttatccaagactttgcagcaaaatacacagatgttgagttcatcaagattgatgtgga 239
||||| |||| ||||| ||||| |||||| ||||||||||||| ||||||||||||||
Sbjct: 267 ttatcaaagagtttgctgcaaagtacacaaatgttgagttcattaagattgatgtgga 324
>gnl|LJGI|TC65208 weakly similar to UniRef100_Q5ZF46 Cluster: Thioredoxin 3; n=1;
Plantago major|Rep: Thioredoxin 3 - Plantago major
(Common plantain), partial (56%)
Length = 691
Score = 155 bits (78), Expect = 3e-37
Identities = 204/246 (82%)
Strand = Plus / Plus
Query: 62 tcaccttccattccactgctaaatggaatgctcattttgatgccttcaaacaaactgaca 121
|||||||||||| ||||||||||||||| ||||| ||||||| | ||| ||||| |||
Sbjct: 157 tcaccttccatttcactgctaaatggaaggctcaccttgatgcatctaaagaaactaaca 216
Query: 122 agctgatggtgattgatttcacagctaaatggtgtggaccctgcaaactcatggacccag 181
| ||||||||||| ||||| || ||||||||||| ||||| |||||| |||||| |||
Sbjct: 217 aactgatggtgatcgattttacggctaaatggtgcggaccttgcaaatccatggagccaa 276
Query: 182 ttatccaagactttgcagcaaaatacacagatgttgagttcatcaagattgatgtggagg 241
|||||||||| |||| |||||||| ||| | ||||| |||||||||||||||||||| |
Sbjct: 277 ttatccaagagtttgttgcaaaatatacaaaagttgaattcatcaagattgatgtggatg 336
Query: 242 agttattcgaagtgtctcaaagattccaagtgcaggcactgccagctttcatactcatta 301
| ||| | || || ||||| |||||| ||||||||| ||||| | |||||| | || |
Sbjct: 337 aattaatggaggttactcaagaattccaggtgcaggcaatgccaacattcatattgatga 396
Query: 302 agaaag 307
||||||
Sbjct: 397 agaaag 402