Miyakogusa Predicted Gene
- Lj2g3v1349220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1349220.1 Non Chatacterized Hit- tr|D7L574|D7L574_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,69.74,9e-18,seg,NULL,CUFF.36800.1
(1269 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71890 similar to UniRef100_A7Q2Q1 Cluster: Chromosome... 1641 0.0
gnl|LJGI|TC77523 similar to UniRef100_A7Q2Q1 Cluster: Chromosome... 884 0.0
gnl|LJGI|BW631589 similar to UniRef100_A7Q2Q1 Cluster: Chromosom... 638 0.0
gnl|LJGI|BW604679 similar to UniRef100_A7Q2Q1 Cluster: Chromosom... 529 e-149
gnl|LJGI|BW615174 similar to UniRef100_A7Q2Q1 Cluster: Chromosom... 381 e-105
gnl|LJGI|BP073437 weakly similar to UniRef100_A7Q2Q1 Cluster: Ch... 274 1e-72
>gnl|LJGI|TC71890 similar to UniRef100_A7Q2Q1 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 986
Score = 1641 bits (828), Expect = 0.0
Identities = 828/828 (100%)
Strand = Plus / Plus
Query: 1 atggcggccaccgcagcaaacgacggccccgtcctgaaccttatcaacaagcgcctccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atggcggccaccgcagcaaacgacggccccgtcctgaaccttatcaacaagcgcctccgc 218
Query: 61 gccctccgcaagaagcagaaccgcatcaccgccatggaagagtcactcgctcagggaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gccctccgcaagaagcagaaccgcatcaccgccatggaagagtcactcgctcagggaaag 278
Query: 121 cccttgaacaaggagcaagaggaagtcctccgttccaaaccctccgtcctcgccctcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cccttgaacaaggagcaagaggaagtcctccgttccaaaccctccgtcctcgccctcatc 338
Query: 181 gacgagctcgagaagcttcgccagcctctctcctctgccctagccgaagaactcgacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gacgagctcgagaagcttcgccagcctctctcctctgccctagccgaagaactcgacctg 398
Query: 241 gctctccaaaatcgcggtggaaccctacctgagacgacgcagcagcgcccgaactcgacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gctctccaaaatcgcggtggaaccctacctgagacgacgcagcagcgcccgaactcgacc 458
Query: 301 ggaagcgacgtcgtcgaggacattctcaacttgctctacttaggctcgctctttgaggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ggaagcgacgtcgtcgaggacattctcaacttgctctacttaggctcgctctttgaggtg 518
Query: 361 aagtcgcagaacgacttcacatcgacgatgcttaccaggacgctcgagcgtggttgctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aagtcgcagaacgacttcacatcgacgatgcttaccaggacgctcgagcgtggttgctgc 578
Query: 421 ttgacttatgactatgtcaccgacgacgccaccgatctgctcggggagaaggacctggac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttgacttatgactatgtcaccgacgacgccaccgatctgctcggggagaaggacctggac 638
Query: 481 tcgatttccgacctgcggggtttgttgatctcgcgccccgccgattcgagcttctcccac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tcgatttccgacctgcggggtttgttgatctcgcgccccgccgattcgagcttctcccac 698
Query: 541 aagaacgcgctgcaacggtgcattgagcacgcgaagctctggctgtctaaggctgaacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aagaacgcgctgcaacggtgcattgagcacgcgaagctctggctgtctaaggctgaacag 758
Query: 601 cccattgagcccaatgctggtgttacatatgctggtttgagggacaagttgaataagatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 cccattgagcccaatgctggtgttacatatgctggtttgagggacaagttgaataagatt 818
Query: 661 atgtcgtcggagtacttcaccaccacacctgagatgaaagctccgggtgaagttgctgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 atgtcgtcggagtacttcaccaccacacctgagatgaaagctccgggtgaagttgctgct 878
Query: 721 gccgctgctggaagttatggatctttccaggtgccggtgcatgactctccggttcacgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 gccgctgctggaagttatggatctttccaggtgccggtgcatgactctccggttcacgtg 938
Query: 781 gaagtcgagggttctgattctcagcctcaggagaaggatcagggaacc 828
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 gaagtcgagggttctgattctcagcctcaggagaaggatcagggaacc 986
>gnl|LJGI|TC77523 similar to UniRef100_A7Q2Q1 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 631
Score = 884 bits (446), Expect = 0.0
Identities = 446/446 (100%)
Strand = Plus / Plus
Query: 824 gaaccattaatttccaaggacatggatctacagatgatcagtctgatcctgaacgggagc 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaccattaatttccaaggacatggatctacagatgatcagtctgatcctgaacgggagc 60
Query: 884 ttcagaaggaagatgtagaagcagaaaatgcagttgaggtggagtatgttgaacatgaac 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcagaaggaagatgtagaagcagaaaatgcagttgaggtggagtatgttgaacatgaac 120
Query: 944 agaccaatccccaggtggctggagagctcaatcaaccagatgtagatgcaaaggatcaac 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaccaatccccaggtggctggagagctcaatcaaccagatgtagatgcaaaggatcaac 180
Query: 1004 attacccgaggaggggttatcagaaccaacgcggtggtcgtggtggaggtggtcgaaggg 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attacccgaggaggggttatcagaaccaacgcggtggtcgtggtggaggtggtcgaaggg 240
Query: 1064 gttactcaaatggacggggtcgtggtggaagcagaggaggctactaccaaaatggccgca 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttactcaaatggacggggtcgtggtggaagcagaggaggctactaccaaaatggccgca 300
Query: 1124 atcaatacgctgaccagcccgggaattactatcctaggaacaattataacaatagaggaa 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcaatacgctgaccagcccgggaattactatcctaggaacaattataacaatagaggaa 360
Query: 1184 gaggtggcagaggctcatatggcaacaatggttcaggtggttttgttaataatgttgcag 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggtggcagaggctcatatggcaacaatggttcaggtggttttgttaataatgttgcag 420
Query: 1244 gtgatgtgggggtgcaatcgtaacta 1269
||||||||||||||||||||||||||
Sbjct: 421 gtgatgtgggggtgcaatcgtaacta 446
>gnl|LJGI|BW631589 similar to UniRef100_A7Q2Q1 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 486
Score = 638 bits (322), Expect = 0.0
Identities = 322/322 (100%)
Strand = Plus / Plus
Query: 1 atggcggccaccgcagcaaacgacggccccgtcctgaaccttatcaacaagcgcctccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atggcggccaccgcagcaaacgacggccccgtcctgaaccttatcaacaagcgcctccgc 224
Query: 61 gccctccgcaagaagcagaaccgcatcaccgccatggaagagtcactcgctcagggaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gccctccgcaagaagcagaaccgcatcaccgccatggaagagtcactcgctcagggaaag 284
Query: 121 cccttgaacaaggagcaagaggaagtcctccgttccaaaccctccgtcctcgccctcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cccttgaacaaggagcaagaggaagtcctccgttccaaaccctccgtcctcgccctcatc 344
Query: 181 gacgagctcgagaagcttcgccagcctctctcctctgccctagccgaagaactcgacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gacgagctcgagaagcttcgccagcctctctcctctgccctagccgaagaactcgacctg 404
Query: 241 gctctccaaaatcgcggtggaaccctacctgagacgacgcagcagcgcccgaactcgacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gctctccaaaatcgcggtggaaccctacctgagacgacgcagcagcgcccgaactcgacc 464
Query: 301 ggaagcgacgtcgtcgaggaca 322
||||||||||||||||||||||
Sbjct: 465 ggaagcgacgtcgtcgaggaca 486
>gnl|LJGI|BW604679 similar to UniRef100_A7Q2Q1 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 452
Score = 529 bits (267), Expect = e-149
Identities = 267/267 (100%)
Strand = Plus / Plus
Query: 1 atggcggccaccgcagcaaacgacggccccgtcctgaaccttatcaacaagcgcctccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 atggcggccaccgcagcaaacgacggccccgtcctgaaccttatcaacaagcgcctccgc 245
Query: 61 gccctccgcaagaagcagaaccgcatcaccgccatggaagagtcactcgctcagggaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gccctccgcaagaagcagaaccgcatcaccgccatggaagagtcactcgctcagggaaag 305
Query: 121 cccttgaacaaggagcaagaggaagtcctccgttccaaaccctccgtcctcgccctcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cccttgaacaaggagcaagaggaagtcctccgttccaaaccctccgtcctcgccctcatc 365
Query: 181 gacgagctcgagaagcttcgccagcctctctcctctgccctagccgaagaactcgacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gacgagctcgagaagcttcgccagcctctctcctctgccctagccgaagaactcgacctg 425
Query: 241 gctctccaaaatcgcggtggaacccta 267
|||||||||||||||||||||||||||
Sbjct: 426 gctctccaaaatcgcggtggaacccta 452
>gnl|LJGI|BW615174 similar to UniRef100_A7Q2Q1 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 488
Score = 381 bits (192), Expect = e-105
Identities = 195/196 (99%)
Strand = Plus / Plus
Query: 245 tccaaaatcgcggtggaaccctacctgagacgacgcagcagcgcccgaactcgaccggaa 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tccaaaatcgcggtggaaccctacctgagacgacgcagcagcgcccgaactcgaccggag 352
Query: 305 gcgacgtcgtcgaggacattctcaacttgctctacttaggctcgctctttgaggtgaagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gcgacgtcgtcgaggacattctcaacttgctctacttaggctcgctctttgaggtgaagt 412
Query: 365 cgcagaacgacttcacatcgacgatgcttaccaggacgctcgagcgtggttgctgcttga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cgcagaacgacttcacatcgacgatgcttaccaggacgctcgagcgtggttgctgcttga 472
Query: 425 cttatgactatgtcac 440
||||||||||||||||
Sbjct: 473 cttatgactatgtcac 488
Score = 315 bits (159), Expect = 4e-85
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 1 atggcggccaccgcagcaaacgacggccccgtcctgaaccttatcaacaagcgcctccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atggcggccaccgcagcaaacgacggccccgtcctgaaccttatcaacaagcgcctccgc 199
Query: 61 gccctccgcaagaagcagaaccgcatcaccgccatggaagagtcactcgctcagggaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gccctccgcaagaagcagaaccgcatcaccgccatggaagagtcactcgctcagggaaag 259
Query: 121 cccttgaacaaggagcaagaggaagtcctccgttccaaa 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cccttgaacaaggagcaagaggaagtcctccgttccaaa 298
>gnl|LJGI|BP073437 weakly similar to UniRef100_A7Q2Q1 Cluster: Chromosome chr1
scaffold_46, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_46, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 376
Score = 274 bits (138), Expect = 1e-72
Identities = 222/238 (93%), Gaps = 9/238 (3%)
Strand = Plus / Minus
Query: 1041 tcgtggtggagg-tggtcgaagggg-ttac-tcaaat-ggac-ggggt-cgtggtggaag 1094
|||||||||||| |||||||||||| |||| |||||| |||| ||||| |||||||||||
Sbjct: 329 tcgtggtggagggtggtcgaagggggttacgtcaaattggaccggggtgcgtggtggaag 270
Query: 1095 ca-gaggaggctactaccaaaatggccgcaatcaatacgctgaccagcccgggaa-ttac 1152
|| ||||||| ||||||| || ||||||||||| ||||||||||||||||||| | ||||
Sbjct: 269 cacgaggagggtactacccaactggccgcaatccatacgctgaccagcccgggcacttac 210
Query: 1153 tatcctaggaacaattataacaatagaggaagaggtggcagaggctcatatggcaacaat 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 209 tatcctaggaacaattataacaatagaggaagaggtggcagaggctcatatggcaaccat 150
Query: 1213 ggttcaggtggttttgttaataatgttgcaggtga-tgtgggggtgcaatcgtaacta 1269
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 149 ggttcaggtggttttgttaataatgttgcaggtgactgtgggggtgcgatcgtaacta 92