Miyakogusa Predicted Gene

Lj2g3v1349190.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1349190.1 Non Chatacterized Hit- tr|B9S0F9|B9S0F9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,30.72,0.0000000000007,seg,NULL; coiled-coil,NULL; 5-AMP-ACTIVATED
PROTEIN KINASE , BETA SUBUNIT,NULL; 5'-AMP-ACTIVATED PRO,CUFF.36774.1
         (1542 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW600717 weakly similar to UniRef100_Q3LAF9 Cluster: Pe...   442   e-123

>gnl|LJGI|BW600717 weakly similar to UniRef100_Q3LAF9 Cluster: Pentatricopeptide
           repeat-containing protein; n=1; Hordeum vulgare|Rep:
           Pentatricopeptide repeat-containing protein - Hordeum
           vulgare (Barley), partial (3%)
          Length = 455

 Score =  442 bits (223), Expect = e-123
 Identities = 223/223 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcattcgctcaccgcacgctctccttcaatgctcatcccccatttgactccttctctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atgcattcgctcaccgcacgctctccttcaatgctcatcccccatttgactccttctctc 292

                                                                       
Query: 61  gttcccccgcacttcgcctcattcagaagggtggagaggttcgcggcgttatgcgaacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gttcccccgcacttcgcctcattcagaagggtggagaggttcgcggcgttatgcgaacct 352

                                                                       
Query: 121 ggttcggttctgtggcgcgagggtcccttcaggaatgggagtgttgggagtgtcagtgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggttcggttctgtggcgcgagggtcccttcaggaatgggagtgttgggagtgtcagtgtc 412

                                                      
Query: 181 tacaagggtttgtgctccgtgtggcggtgcaagggtagggacg 223
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tacaagggtttgtgctccgtgtggcggtgcaagggtagggacg 455