Miyakogusa Predicted Gene
- Lj2g3v1339000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1339000.1 tr|F6ACW6|F6ACW6_PSEF1 PAS/PAC sensor hybrid
histidine kinase OS=Pseudomonas fulva (strain 12-X)
GN=,39.66,3e-19,PYP-like sensor domain (PAS domain),NULL; sensory_box:
PAS domain S-box protein,PAS domain; seg,NULL,CUFF.36793.1
(628 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57783 weakly similar to UniRef100_A7Q2R5 Cluster: Chr... 1120 0.0
gnl|LJGI|FS343274 similar to UniRef100_O64511 Cluster: Protein T... 801 0.0
>gnl|LJGI|TC57783 weakly similar to UniRef100_A7Q2R5 Cluster: Chromosome chr1
scaffold_46, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_46, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 795
Score = 1120 bits (565), Expect = 0.0
Identities = 565/565 (100%)
Strand = Plus / Plus
Query: 1 atgacgacggagttcgaagattccaagcttcttgcggtggagagttccttcgacaaccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atgacgacggagttcgaagattccaagcttcttgcggtggagagttccttcgacaaccgt 290
Query: 61 tactcccgccacgcgcgcgagtcgctcgacgaattgactgatacaagtttcaccatcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tactcccgccacgcgcgcgagtcgctcgacgaattgactgatacaagtttcaccatcacc 350
Query: 121 gacccttccgtctccggccacccaatcgtcttcgccagcctcggcttcctcaagatgacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gacccttccgtctccggccacccaatcgtcttcgccagcctcggcttcctcaagatgacc 410
Query: 181 gggttctcgcgggatgaggttgttggcagaggcggggggatgttccaggggccgggaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gggttctcgcgggatgaggttgttggcagaggcggggggatgttccaggggccgggaacc 470
Query: 241 tgtagaaggtcggtgatggcgattcgtgaggccgtaagggaagagaaggaggctcaggtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tgtagaaggtcggtgatggcgattcgtgaggccgtaagggaagagaaggaggctcaggtc 530
Query: 301 gttttgttgaattaccgcaaggatggcacgccgttttggatgctgcttcttgtgtgtccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gttttgttgaattaccgcaaggatggcacgccgttttggatgctgcttcttgtgtgtccg 590
Query: 361 gttttcagtgcgagctccggtggtgttgttcactttgtcgccgttcaggtgccgcttcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gttttcagtgcgagctccggtggtgttgttcactttgtcgccgttcaggtgccgcttcac 650
Query: 421 cgccggagacacggggattttcccggaggaggaggtggggggttttcacaggtgcatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cgccggagacacggggattttcccggaggaggaggtggggggttttcacaggtgcatgat 710
Query: 481 tttgtgttccggtgttgtcggaaggaagtgtgctctgattctttggctgaacttggtcgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tttgtgttccggtgttgtcggaaggaagtgtgctctgattctttggctgaacttggtcgt 770
Query: 541 gtttcttccctcaatcaagtgttgg 565
|||||||||||||||||||||||||
Sbjct: 771 gtttcttccctcaatcaagtgttgg 795
>gnl|LJGI|FS343274 similar to UniRef100_O64511 Cluster: Protein Twin LOV 1; n=1;
Arabidopsis thaliana|Rep: Protein Twin LOV 1 -
Arabidopsis thaliana (Mouse-ear cress), partial (25%)
Length = 734
Score = 801 bits (404), Expect = 0.0
Identities = 404/404 (100%)
Strand = Plus / Plus
Query: 1 atgacgacggagttcgaagattccaagcttcttgcggtggagagttccttcgacaaccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atgacgacggagttcgaagattccaagcttcttgcggtggagagttccttcgacaaccgt 390
Query: 61 tactcccgccacgcgcgcgagtcgctcgacgaattgactgatacaagtttcaccatcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tactcccgccacgcgcgcgagtcgctcgacgaattgactgatacaagtttcaccatcacc 450
Query: 121 gacccttccgtctccggccacccaatcgtcttcgccagcctcggcttcctcaagatgacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gacccttccgtctccggccacccaatcgtcttcgccagcctcggcttcctcaagatgacc 510
Query: 181 gggttctcgcgggatgaggttgttggcagaggcggggggatgttccaggggccgggaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gggttctcgcgggatgaggttgttggcagaggcggggggatgttccaggggccgggaacc 570
Query: 241 tgtagaaggtcggtgatggcgattcgtgaggccgtaagggaagagaaggaggctcaggtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tgtagaaggtcggtgatggcgattcgtgaggccgtaagggaagagaaggaggctcaggtc 630
Query: 301 gttttgttgaattaccgcaaggatggcacgccgttttggatgctgcttcttgtgtgtccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gttttgttgaattaccgcaaggatggcacgccgttttggatgctgcttcttgtgtgtccg 690
Query: 361 gttttcagtgcgagctccggtggtgttgttcactttgtcgccgt 404
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gttttcagtgcgagctccggtggtgttgttcactttgtcgccgt 734