Miyakogusa Predicted Gene
- Lj2g3v1338980.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1338980.2 Non Chatacterized Hit- tr|G7K9S6|G7K9S6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,72.73,0,seg,NULL,CUFF.36770.2
(1629 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS340929 similar to UniRef100_A7QW01 Cluster: Chromosom... 299 3e-80
gnl|LJGI|AV415385 similar to UniRef100_Q9LVI0 Cluster: Genomic D... 131 2e-29
gnl|LJGI|AV426232 similar to UniRef100_A7Q2R7 Cluster: Chromosom... 101 1e-20
gnl|LJGI|FS343765 similar to UniRef100_Q9LVI0 Cluster: Genomic D... 82 1e-14
gnl|LJGI|TC69962 weakly similar to UniRef100_Q10RM9 Cluster: Exp... 82 1e-14
>gnl|LJGI|FS340929 similar to UniRef100_A7QW01 Cluster: Chromosome chr2 scaffold_196,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_196, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 626
Score = 299 bits (151), Expect = 3e-80
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 1 atgaattgccgattggggttgataagcatgtggatgttgctgaagatgaaggatggatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 atgaattgccgattggggttgataagcatgtggatgttgctgaagatgaaggatggatca 416
Query: 61 ccattccatataaggaacttcctgaaaattggaatcatgtgccagaaatacagtccctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ccattccatataaggaacttcctgaaaattggaatcatgtgccagaaatacagtccctgc 476
Query: 121 gcactcttgatcgaccctttcttcttcctgg 151
|||||||||||||||||||||||||||||||
Sbjct: 477 gcactcttgatcgaccctttcttcttcctgg 507
Score = 153 bits (77), Expect = 4e-36
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 150 ggatacaaagatgattactccgtttaaagtttccgctatggcgagtgcaaatggcacagg 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ggatacaaagatgattactccgtttaaagtttccgctatggcgagtgcaaatggcacagg 609
Query: 210 tcaaagccctgagaaag 226
|||||||||||||||||
Sbjct: 610 tcaaagccctgagaaag 626
>gnl|LJGI|AV415385 similar to UniRef100_Q9LVI0 Cluster: Genomic DNA, chromosome 3, P1
clone: MEB5; n=1; Arabidopsis thaliana|Rep: Genomic DNA,
chromosome 3, P1 clone: MEB5 - Arabidopsis thaliana
(Mouse-ear cress), partial (6%)
Length = 204
Score = 131 bits (66), Expect = 2e-29
Identities = 143/168 (85%), Gaps = 3/168 (1%)
Strand = Plus / Plus
Query: 845 cttcaaattcagggattagtagcacctctcagaggtccaattttccagcatcatccggct 904
|||| |||||||| ||| |||||||||||||||||||||| || |||||||||| || |
Sbjct: 15 cttcgaattcaggaattggtagcacctctcagaggtccaacatttcagcatcatctggtt 74
Query: 905 ctcagttattctcctttggca---atttcagaagttactccatgtcatcattaccccaaa 961
||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||
Sbjct: 75 ctcagttattctcctttggcagccattttagaagctattccatgtcatcattaccccaaa 134
Query: 962 ctaccaccactccaaatgctcctgttaaagcagtgagttctaagccaa 1009
||| | ||||| ||||||| | ||||||| |||||||||||||
Sbjct: 135 gtacgagtggtccaactgctcctctaaaagcagctagttctaagccaa 182
>gnl|LJGI|AV426232 similar to UniRef100_A7Q2R7 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 413
Score = 101 bits (51), Expect = 1e-20
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 1390 cattcttttccaaatctagccctcaggagaggtgaagagcattcttttatccttaaacc 1448
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cattctttaccaaatttagccctcaggagaggtgaagagcattcttttatccttaaacc 60
Score = 65.9 bits (33), Expect = 7e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1552 tatgctattatggtgtcatgtcgatgcaattatacag 1588
||||| |||||||||||||||||||||||||||||||
Sbjct: 187 tatgcaattatggtgtcatgtcgatgcaattatacag 223
>gnl|LJGI|FS343765 similar to UniRef100_Q9LVI0 Cluster: Genomic DNA, chromosome 3, P1
clone: MEB5; n=1; Arabidopsis thaliana|Rep: Genomic DNA,
chromosome 3, P1 clone: MEB5 - Arabidopsis thaliana
(Mouse-ear cress), partial (9%)
Length = 823
Score = 81.8 bits (41), Expect = 1e-14
Identities = 110/133 (82%)
Strand = Plus / Plus
Query: 150 ggatacaaagatgattactccgtttaaagtttccgctatggcgagtgcaaatggcacagg 209
||||||| |||| |||||||| ||||||||| | ||| || |||| ||||||| | |
Sbjct: 596 ggatacagagattattactccatttaaagttgctgctgtgatgagtaggaatggcataag 655
Query: 210 tcaaagccctgagaaagaaaatggaaacactgaaaacagaattaattcagtatctggaga 269
||| ||||||||||||||||||||||||| ||||| || ||| ||||||||||||||
Sbjct: 656 tcacagccctgagaaagaaaatggaaacatggaaaatgaaagtaactcagtatctggaga 715
Query: 270 aggggaactgagt 282
|||| ||| ||||
Sbjct: 716 agggcaaccgagt 728
Score = 65.9 bits (33), Expect = 7e-10
Identities = 99/121 (81%)
Strand = Plus / Plus
Query: 31 tggatgttgctgaagatgaaggatggatcaccattccatataaggaacttcctgaaaatt 90
|||||||| ||||||| || |||||||| |||||||||| || || |||||||| | |
Sbjct: 433 tggatgtttctgaagaagacggatggattgccattccatacaatgagtttcctgaagact 492
Query: 91 ggaatcatgtgccagaaatacagtccctgcgcactcttgatcgaccctttcttcttcctg 150
|||||||||| |||| |||||||| ||||| |||| ||||| ||||||| ||||||
Sbjct: 493 ggaatcatgtatcagatatacagtctttgcgcgctctagatcgttcctttctctttcctg 552
Query: 151 g 151
|
Sbjct: 553 g 553
>gnl|LJGI|TC69962 weakly similar to UniRef100_Q10RM9 Cluster: Expressed protein; n=1;
Oryza sativa Japonica Group|Rep: Expressed protein -
Oryza sativa subsp. japonica (Rice), partial (9%)
Length = 719
Score = 81.8 bits (41), Expect = 1e-14
Identities = 110/133 (82%)
Strand = Plus / Plus
Query: 150 ggatacaaagatgattactccgtttaaagtttccgctatggcgagtgcaaatggcacagg 209
||||||| |||| |||||||| ||||||||| | ||| || |||| ||||||| | |
Sbjct: 482 ggatacagagattattactccatttaaagttgctgctgtgatgagtaggaatggcataag 541
Query: 210 tcaaagccctgagaaagaaaatggaaacactgaaaacagaattaattcagtatctggaga 269
||| ||||||||||||||||||||||||| ||||| || ||| ||||||||||||||
Sbjct: 542 tcacagccctgagaaagaaaatggaaacatggaaaatgaaagtaactcagtatctggaga 601
Query: 270 aggggaactgagt 282
|||| ||| ||||
Sbjct: 602 agggcaaccgagt 614
Score = 65.9 bits (33), Expect = 7e-10
Identities = 99/121 (81%)
Strand = Plus / Plus
Query: 31 tggatgttgctgaagatgaaggatggatcaccattccatataaggaacttcctgaaaatt 90
|||||||| ||||||| || |||||||| |||||||||| || || |||||||| | |
Sbjct: 319 tggatgtttctgaagaagacggatggattgccattccatacaatgagtttcctgaagact 378
Query: 91 ggaatcatgtgccagaaatacagtccctgcgcactcttgatcgaccctttcttcttcctg 150
|||||||||| |||| |||||||| ||||| |||| ||||| ||||||| ||||||
Sbjct: 379 ggaatcatgtatcagatatacagtctttgcgcgctctagatcgttcctttctctttcctg 438
Query: 151 g 151
|
Sbjct: 439 g 439