Miyakogusa Predicted Gene
- Lj2g3v1338980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1338980.1 Non Chatacterized Hit- tr|G7K9S6|G7K9S6_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,75.8,0,
,CUFF.36770.1
(1629 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71379 similar to UniRef100_A7Q2R7 Cluster: Chromosome... 321 8e-87
gnl|LJGI|AV426232 similar to UniRef100_A7Q2R7 Cluster: Chromosom... 244 1e-63
gnl|LJGI|TC81444 similar to UniRef100_A7Q2R7 Cluster: Chromosome... 161 2e-38
gnl|LJGI|AV415385 similar to UniRef100_Q9LVI0 Cluster: Genomic D... 131 2e-29
gnl|LJGI|TC60747 similar to UniRef100_A7QW01 Cluster: Chromosome... 111 1e-23
gnl|LJGI|TC82689 weakly similar to UniRef100_Q8RX28 Cluster: His... 92 1e-17
>gnl|LJGI|TC71379 similar to UniRef100_A7Q2R7 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 620
Score = 321 bits (162), Expect = 8e-87
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 1468 tgtacacatctatggctgcagagtagagttccacttggatgtattccgcctcgatccgta 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtacacatctatggctgcagagtagagttccacttggatgtattccgcctcgatccgta 60
Query: 1528 gccactatcaagctcgaactgcttccattgacttatggcataattacgctagactctctg 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccactatcaagctcgaactgcttccattgacttatggcataattacgctagactctctg 120
Query: 1588 caaattgatgtcaaggaaaaaggtattacttttatccctgag 1629
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaattgatgtcaaggaaaaaggtattacttttatccctgag 162
>gnl|LJGI|AV426232 similar to UniRef100_A7Q2R7 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 413
Score = 244 bits (123), Expect = 1e-63
Identities = 201/227 (88%)
Strand = Plus / Plus
Query: 1000 tatgctattatggtgtcatgtcgatgcaattatacagcatcgagattgttctttaagcaa 1059
||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 187 tatgcaattatggtgtcatgtcgatgcaattatacagcatcaaggttattctttaagcaa 246
Query: 1060 ccaaccagttggcgaccacgcacctcaagggacatcatgatctctgttgcatcagagagg 1119
|||||||||||||| |||||||| |||||||| || ||||||||||||||||| |||| |
Sbjct: 247 ccaaccagttggcggccacgcacttcaagggatattatgatctctgttgcatctgagatg 306
Query: 1120 tcaggacagtcaagaggagcttatggaaaatatagccaacttcctgtgcagatcttaact 1179
||||||||||| ||| ||| || || | || |||||||||||| ||| | ||||||
Sbjct: 307 tcaggacagtctcctggaccttctgaaagaaattcccaacttcctgtacaggttttaact 366
Query: 1180 cttcaagcttcaaatttgacatctgaagatctaactttgacagtgct 1226
|||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 367 tttcaagcttcaaatttgacacctgaagatctaactttgacagtgct 413
Score = 101 bits (51), Expect = 1e-20
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 838 cattcttttccaaatctagccctcaggagaggtgaagagcattcttttatccttaaacc 896
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cattctttaccaaatttagccctcaggagaggtgaagagcattcttttatccttaaacc 60
>gnl|LJGI|TC81444 similar to UniRef100_A7Q2R7 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 1248
Score = 161 bits (81), Expect = 2e-38
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1532 ctatcaagctcgaactgcttccattgacttatggcataattacgctagactctctgcaaa 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctatcaagctcgaactgcttccattgacttatggcataattacgctagactctctgcaaa 60
Query: 1592 ttgatgtcaaggaaaaaggta 1612
|||||||||||||||||||||
Sbjct: 61 ttgatgtcaaggaaaaaggta 81
>gnl|LJGI|AV415385 similar to UniRef100_Q9LVI0 Cluster: Genomic DNA, chromosome 3, P1
clone: MEB5; n=1; Arabidopsis thaliana|Rep: Genomic DNA,
chromosome 3, P1 clone: MEB5 - Arabidopsis thaliana
(Mouse-ear cress), partial (6%)
Length = 204
Score = 131 bits (66), Expect = 2e-29
Identities = 143/168 (85%), Gaps = 3/168 (1%)
Strand = Plus / Plus
Query: 293 cttcaaattcagggattagtagcacctctcagaggtccaattttccagcatcatccggct 352
|||| |||||||| ||| |||||||||||||||||||||| || |||||||||| || |
Sbjct: 15 cttcgaattcaggaattggtagcacctctcagaggtccaacatttcagcatcatctggtt 74
Query: 353 ctcagttattctcctttggca---atttcagaagttactccatgtcatcattaccccaaa 409
||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||
Sbjct: 75 ctcagttattctcctttggcagccattttagaagctattccatgtcatcattaccccaaa 134
Query: 410 ctaccaccactccaaatgctcctgttaaagcagtgagttctaagccaa 457
||| | ||||| ||||||| | ||||||| |||||||||||||
Sbjct: 135 gtacgagtggtccaactgctcctctaaaagcagctagttctaagccaa 182
>gnl|LJGI|TC60747 similar to UniRef100_A7QW01 Cluster: Chromosome chr2 scaffold_196,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_196, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 770
Score = 111 bits (56), Expect = 1e-23
Identities = 137/164 (83%)
Strand = Plus / Plus
Query: 1466 gttgtacacatctatggctgcagagtagagttccacttggatgtattccgcctcgatccg 1525
||||||| ||||| ||| |||||||| ||||||| || |||| ||| || ||| |||
Sbjct: 180 gttgtacccatctgtggttgcagagtcgagttccgctcggatctatcccatctcagtcca 239
Query: 1526 tagccactatcaagctcgaactgcttccattgacttatggcataattacgctagactctc 1585
|||||| || |||||||| || |||||||||||| ||||||||||||| || ||||||
Sbjct: 240 cagccaccattaagctcgagctacttccattgactgatggcataattacacttgactctt 299
Query: 1586 tgcaaattgatgtcaaggaaaaaggtattacttttatccctgag 1629
|||||||||||||||| ||||||||| |||| | |||||||||
Sbjct: 300 tgcaaattgatgtcaaagaaaaaggtgttacctacatccctgag 343
>gnl|LJGI|TC82689 weakly similar to UniRef100_Q8RX28 Cluster: Histone deacetylase 5;
n=1; Arabidopsis thaliana|Rep: Histone deacetylase 5 -
Arabidopsis thaliana (Mouse-ear cress), partial (6%)
Length = 1264
Score = 91.7 bits (46), Expect = 1e-17
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 1356 ctggagacagagattcacttctattatgaataaaaatgagaaacaaagttatgatggcga 1415
|||||| ||||||||||| || ||||||||| ||||| ||||||||| ||||||||| |
Sbjct: 970 ctggaggcagagattcacgtcgattatgaatgaaaattagaaacaaatttatgatggtgg 1029
Query: 1416 agctcaggcagtttctatgagtgacgatggcattccta 1453
||||| ||| ||||||||||||| ||||||||||||
Sbjct: 1030 ggctcaagcattttctatgagtgatcatggcattccta 1067