Miyakogusa Predicted Gene

Lj2g3v1338890.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1338890.1 Non Chatacterized Hit- tr|I1N185|I1N185_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,56.31,4e-19,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; AP2,AP2/ERF domain,CUFF.36743.1
         (288 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC595978 similar to UniRef100_A7PMN8 Cluster: Chromosom...    54   5e-07
gnl|LJGI|FS342341 homologue to UniRef100_Q6PQQ3 Cluster: AP2-lik...    50   7e-06
gnl|LJGI|TC58976 homologue to UniRef100_A9JQY7 Cluster: AP2 prot...    50   7e-06

>gnl|LJGI|DC595978 similar to UniRef100_A7PMN8 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 554

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 184 aagagaagctcaaggtttaggggagtaagcagacataggtggacaggaaggtatgaagc 242
           |||||||| ||||| |||||||| || ||||||||||| ||||| || || ||||||||
Sbjct: 223 aagagaagttcaagatttaggggtgtcagcagacatagatggacgggtagatatgaagc 281


>gnl|LJGI|FS342341 homologue to UniRef100_Q6PQQ3 Cluster: AP2-like ethylene-responsive
           transcription factor AINTEGUMENTA-LIKE 5; n=1;
           Arabidopsis thaliana|Rep: AP2-like ethylene-responsive
           transcription factor AINTEGUMENTA-LIKE 5 - Arabidopsis
           thaliana (Mouse-ear cress), partial (11%)
          Length = 723

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 213 cagacataggtggacaggaaggtatgaagcccatctatgggataa 257
           ||||||||| ||||| || || |||||||| ||||||||||||||
Sbjct: 451 cagacatagatggactgggagatatgaagctcatctatgggataa 495


>gnl|LJGI|TC58976 homologue to UniRef100_A9JQY7 Cluster: AP2 protein; n=1; Elaeis
           guineensis|Rep: AP2 protein - Elaeis guineensis var.
           tenera (Oil palm), partial (42%)
          Length = 1188

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 213 cagacataggtggacaggaaggtatgaagcccatctatgggataa 257
           ||||||||| ||||| || || |||||||| ||||||||||||||
Sbjct: 611 cagacatagatggactgggagatatgaagctcatctatgggataa 655