Miyakogusa Predicted Gene
- Lj2g3v1338880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1338880.1 Non Chatacterized Hit- tr|K4C7R5|K4C7R5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,43.06,0.0000003,DNA-binding domain,DNA-binding, integrase-type;
seg,NULL; DNA-binding domain in plant proteins such ,CUFF.36742.1
(774 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75721 similar to UniRef100_Q94AN4 Cluster: AP2-like e... 92 6e-18
gnl|LJGI|TC81475 similar to UniRef100_Q6X5Y6 Cluster: Ethylene-r... 90 2e-17
gnl|LJGI|DC594646 homologue to UniRef100_A7PFK0 Cluster: Chromos... 60 2e-08
>gnl|LJGI|TC75721 similar to UniRef100_Q94AN4 Cluster: AP2-like ethylene-responsive
transcription factor At1g16060; n=1; Arabidopsis
thaliana|Rep: AP2-like ethylene-responsive transcription
factor At1g16060 - Arabidopsis thaliana (Mouse-ear
cress), partial (57%)
Length = 1390
Score = 91.7 bits (46), Expect = 6e-18
Identities = 154/190 (81%)
Strand = Plus / Plus
Query: 14 caaaagaagaatatcttgcttcattgagaaggagaagcagtggtttttctagaggtgtat 73
||||||||||||| ||| || || ||||| ||||||||||| || ||| |||| || |
Sbjct: 428 caaaagaagaatacattggatccttaagaagaagaagcagtgggttctctcgaggagtct 487
Query: 74 caaagtatagaggagtagcaaggcaccatcacaatggaagatgggaagcaaggataggga 133
|||| || |||||||| ||||| ||||| || || |||||||||||||| | || || |
Sbjct: 488 caaaatacagaggagttgcaagacaccaccataacggaagatgggaagctcgaattggca 547
Query: 134 gagtgtttggcaacaagtatctctaccttggaacttacagtactcaagaagaggcagcca 193
| || | |||||||| ||||| ||||||||||||||| ||| |||||||| |||||||
Sbjct: 548 gggtctcgggcaacaaatatctataccttggaacttacgctacacaagaagaagcagcca 607
Query: 194 gggcatatga 203
||||||||
Sbjct: 608 tagcatatga 617
>gnl|LJGI|TC81475 similar to UniRef100_Q6X5Y6 Cluster: Ethylene-responsive
transcription factor WRINKLED 1; n=1; Arabidopsis
thaliana|Rep: Ethylene-responsive transcription factor
WRINKLED 1 - Arabidopsis thaliana (Mouse-ear cress),
partial (32%)
Length = 1269
Score = 89.7 bits (45), Expect = 2e-17
Identities = 165/205 (80%)
Strand = Plus / Plus
Query: 48 aagcagtggtttttctagaggtgtatcaaagtatagaggagtagcaaggcaccatcacaa 107
||||||||||||||||||||| | || ||||| |||| ||||| ||||| || |||||
Sbjct: 231 aagcagtggtttttctagaggcatttctaagtaccgaggggtagccaggcatcaccacaa 290
Query: 108 tggaagatgggaagcaaggatagggagagtgtttggcaacaagtatctctaccttggaac 167
|||| | |||||||| ||||| || ||||| | |||||||||||| ||||| | || ||
Sbjct: 291 tggacgctgggaagctaggattggaagagtatgtggcaacaagtacctctatttggggac 350
Query: 168 ttacagtactcaagaagaggcagccagggcatatgatattgcagcaattgaatacagagg 227
|| | |||||||| |||||||| ||||||||| || ||||||| || |||||||
Sbjct: 351 atataaaactcaagaggaggcagcagtggcatatgacatgacagcaatagagcacagagg 410
Query: 228 aatccatgcagtgaccaactttgac 252
| | ||||||||||||| ||||||
Sbjct: 411 actgaatgcagtgaccaattttgac 435
>gnl|LJGI|DC594646 homologue to UniRef100_A7PFK0 Cluster: Chromosome chr11
scaffold_14, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_14, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 551
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 142 ggcaacaagtatctctaccttggaacttacagtactcaagaagaggcagccagggcatat 201
|||||||| ||||| ||||||||||||||| ||| |||||||| ||||||| ||||||
Sbjct: 426 ggcaacaaatatctataccttggaacttacgctacacaagaagaagcagccatagcatat 485
Query: 202 ga 203
||
Sbjct: 486 ga 487