Miyakogusa Predicted Gene
- Lj2g3v1338720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1338720.1 tr|K0WBV5|K0WBV5_PSEFL VirJ OS=Pseudomonas
fluorescens R124 GN=virJ PE=4 SV=1,50,1.8,seg,NULL;
coiled-coil,NULL,CUFF.36738.1
(444 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC592937 similar to UniRef100_Q10QG3 Cluster: Cupin fam... 343 6e-94
gnl|LJGI|TC80736 343 6e-94
gnl|LJGI|FS343316 311 2e-84
gnl|LJGI|TC79040 similar to UniRef100_A7PM44 Cluster: Oleosin; n... 307 3e-83
gnl|LJGI|TC78642 117 6e-26
gnl|LJGI|TC61745 similar to UniRef100_A7PH52 Cluster: Chromosome... 78 5e-14
gnl|LJGI|FS342767 UniRef100_Q93FJ5 Cluster: EspB; n=1; Citrobact... 66 2e-10
gnl|LJGI|TC81654 66 2e-10
gnl|LJGI|TC60159 similar to UniRef100_Q8RYC8 Cluster: Auxin resp... 56 2e-07
gnl|LJGI|TC79773 similar to UniRef100_A7PP04 Cluster: Chromosome... 54 7e-07
gnl|LJGI|TC60445 similar to UniRef100_A7PH52 Cluster: Chromosome... 54 7e-07
>gnl|LJGI|DC592937 similar to UniRef100_Q10QG3 Cluster: Cupin family protein,
expressed; n=2; Oryza sativa Japonica Group|Rep: Cupin
family protein, expressed - Oryza sativa subsp. japonica
(Rice), partial (4%)
Length = 592
Score = 343 bits (173), Expect = 6e-94
Identities = 193/202 (95%)
Strand = Plus / Plus
Query: 243 ggtggctgctagggtttttggaccctctcnnnnnnngttctccagctgttgttgtcggcc 302
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 307 ggtggctgctagggtttttggaccctctctttttttgttctccagctgttgttgtcggcc 366
Query: 303 cagatcctctattcacccatcatctaggtggtggctctgcggaggagatggttcaaggga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cagatcctctattcacccatcatctaggtggtggctctgcggaggagatggttcaaggga 426
Query: 363 caacgatgcggcggtgactgaacctcacggtgctctggtgcgaaggcgagaggtgtgctc 422
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 427 caacgatgcggcggtgactgaacctcgcggtgctctggtgcggaggcgagaggtgtgctc 486
Query: 423 tgttgggttctttgttttatga 444
||||||||||||||||||||||
Sbjct: 487 tgttgggttctttgttttatga 508
Score = 137 bits (69), Expect = 6e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 atgcacgaacgagcttcctttgcgagattggagaccggatcgtggcgggtcttggccgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atgcacgaacgagcttcctttgcgagattggagaccggatcgtggcgggtcttggccgga 118
Query: 61 gcgtggctt 69
|||||||||
Sbjct: 119 gcgtggctt 127
>gnl|LJGI|TC80736
Length = 1154
Score = 343 bits (173), Expect = 6e-94
Identities = 193/202 (95%)
Strand = Plus / Plus
Query: 243 ggtggctgctagggtttttggaccctctcnnnnnnngttctccagctgttgttgtcggcc 302
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 ggtggctgctagggtttttggaccctctctttttttgttctccagctgttgttgtcggcc 360
Query: 303 cagatcctctattcacccatcatctaggtggtggctctgcggaggagatggttcaaggga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagatcctctattcacccatcatctaggtggtggctctgcggaggagatggttcaaggga 420
Query: 363 caacgatgcggcggtgactgaacctcacggtgctctggtgcgaaggcgagaggtgtgctc 422
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 421 caacgatgcggcggtgactgaacctcgcggtgctctggtgcggaggcgagaggtgtgctc 480
Query: 423 tgttgggttctttgttttatga 444
||||||||||||||||||||||
Sbjct: 481 tgttgggttctttgttttatga 502
Score = 137 bits (69), Expect = 6e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 atgcacgaacgagcttcctttgcgagattggagaccggatcgtggcgggtcttggccgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 atgcacgaacgagcttcctttgcgagattggagaccggatcgtggcgggtcttggccgga 112
Query: 61 gcgtggctt 69
|||||||||
Sbjct: 113 gcgtggctt 121
>gnl|LJGI|FS343316
Length = 754
Score = 311 bits (157), Expect = 2e-84
Identities = 189/202 (93%)
Strand = Plus / Plus
Query: 243 ggtggctgctagggtttttggaccctctcnnnnnnngttctccagctgttgttgtcggcc 302
||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 278 ggtggctgcaagggtttttggaccctctctttttttgttctccagctgttgttttcggcc 337
Query: 303 cagatcctctattcacccatcatctaggtggtggctctgcggaggagatggttcaaggga 362
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 338 cagatcctctattcacccatcatctaggtggtggctctgtggaggagatggatcaaggga 397
Query: 363 caacgatgcggcggtgactgaacctcacggtgctctggtgcgaaggcgagaggtgtgctc 422
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 cgacgatgcagcggtgactgaacctcacggtgctctggtgcgaaggcgagaggtgtgctc 457
Query: 423 tgttgggttctttgttttatga 444
||||||||||||||||||||||
Sbjct: 458 tgttgggttctttgttttatga 479
Score = 137 bits (69), Expect = 6e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 atgcacgaacgagcttcctttgcgagattggagaccggatcgtggcgggtcttggccgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 atgcacgaacgagcttcctttgcgagattggagaccggatcgtggcgggtcttggccgga 74
Query: 61 gcgtggctt 69
|||||||||
Sbjct: 75 gcgtggctt 83
>gnl|LJGI|TC79040 similar to UniRef100_A7PM44 Cluster: Oleosin; n=1; Vitis
vinifera|Rep: Oleosin - Vitis vinifera (Grape), partial
(12%)
Length = 940
Score = 307 bits (155), Expect = 3e-83
Identities = 181/192 (94%)
Strand = Plus / Plus
Query: 253 agggtttttggaccctctcnnnnnnngttctccagctgttgttgtcggcccagatcctct 312
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 426 agggtttttggaccctctctttttttgttctccagctgttgttgtcggcccagatcctct 485
Query: 313 attcacccatcatctaggtggtggctctgcggaggagatggttcaagggacaacgatgcg 372
||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||
Sbjct: 486 attcacccatcatctaggtggtggctctgtggaggagatggatcaagggacgacgatgca 545
Query: 373 gcggtgactgaacctcacggtgctctggtgcgaaggcgagaggtgtgctctgttgggttc 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gcggtgactgaacctcacggtgctctggtgcgaaggcgagaggtgtgctctgttgggttc 605
Query: 433 tttgttttatga 444
||||||||||||
Sbjct: 606 tttgttttatga 617
Score = 137 bits (69), Expect = 6e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 atgcacgaacgagcttcctttgcgagattggagaccggatcgtggcgggtcttggccgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atgcacgaacgagcttcctttgcgagattggagaccggatcgtggcgggtcttggccgga 207
Query: 61 gcgtggctt 69
|||||||||
Sbjct: 208 gcgtggctt 216
>gnl|LJGI|TC78642
Length = 523
Score = 117 bits (59), Expect = 6e-26
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 1 atgcacgaacgagcttcctttgcgagattggagaccggatcgtggcgggtcttggccgga 60
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 atgcacaaaggagcttcctttgcgagattggagaccggatcgtggcgggtcttggccgga 70
Query: 61 gcgtggc 67
|||||||
Sbjct: 71 gcgtggc 77
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 292 tgttgtcggcccagatcctctattcacccatcatctaggt 331
|||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 318 tgttgtcggcccagctcccctattcaaccatcatctaggt 357
>gnl|LJGI|TC61745 similar to UniRef100_A7PH52 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 862
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 381 tgaacctcacggtgctctggtgcgaaggcgagaggtgtgctctgttgggttctttgtttt 440
|||||||| ||||||||||||||| |||||||||||||||| |||| || | ||||||||
Sbjct: 488 tgaacctcgcggtgctctggtgcggaggcgagaggtgtgctttgttcggatttttgtttt 547
Query: 441 atg 443
|||
Sbjct: 548 atg 550
>gnl|LJGI|FS342767 UniRef100_Q93FJ5 Cluster: EspB; n=1; Citrobacter rodentium|Rep:
EspB - Citrobacter rodentium, partial (5%)
Length = 750
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 31 gagaccggatcgtggcgggtcttggccggagcgtggc 67
|||||| ||||||||||||||||||||||||||||||
Sbjct: 189 gagacccgatcgtggcgggtcttggccggagcgtggc 225
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 77 cggggcggttggcggcagtgggaccggagatgggagcgtttggggcc 123
||||||| |||| | || |||||||||||||||||||||||||||||
Sbjct: 259 cggggcgtttggagacattgggaccggagatgggagcgtttggggcc 305
>gnl|LJGI|TC81654
Length = 486
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 31 gagaccggatcgtggcgggtcttggccggagcgtggc 67
|||||| ||||||||||||||||||||||||||||||
Sbjct: 254 gagacccgatcgtggcgggtcttggccggagcgtggc 290
>gnl|LJGI|TC60159 similar to UniRef100_Q8RYC8 Cluster: Auxin response factor 19; n=2;
Arabidopsis thaliana|Rep: Auxin response factor 19 -
Arabidopsis thaliana (Mouse-ear cress), partial (3%)
Length = 1684
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 292 tgttgtcggcccagatcctctattcacccatcatctaggt 331
||||||| |||||| ||| |||||||||||||||||||||
Sbjct: 39 tgttgtctgcccagctccactattcacccatcatctaggt 78
>gnl|LJGI|TC79773 similar to UniRef100_A7PP04 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 482
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 381 tgaacctcacggtgctctggtgcgaaggcgagagg 415
|||||||| ||||||||||||||| ||||||||||
Sbjct: 76 tgaacctcgcggtgctctggtgcggaggcgagagg 110
>gnl|LJGI|TC60445 similar to UniRef100_A7PH52 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 810
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 381 tgaacctcacggtgctctggtgcgaaggcgagagg 415
|||||||| ||||||||||||||| ||||||||||
Sbjct: 482 tgaacctcgcggtgctctggtgcggaggcgagagg 516