Miyakogusa Predicted Gene

Lj2g3v1337640.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1337640.1 tr|A0BDN5|A0BDN5_PARTE Chromosome undetermined
scaffold_100, whole genome shotgun sequence OS=Parame,34.43,7.3,
,CUFF.36732.1
         (232 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78881 similar to UniRef100_A7PHX9 Cluster: Chromosome...    58   2e-08
gnl|LJGI|TC71122 similar to UniRef100_A7QDW7 Cluster: Chromosome...    58   2e-08
gnl|LJGI|TC57807 homologue to UniRef100_A7P5Z2 Cluster: Chromoso...    56   1e-07
gnl|LJGI|BP071122                                                      54   4e-07
gnl|LJGI|TC73566 similar to UniRef100_A6AWY0 Cluster: Response r...    54   4e-07
gnl|LJGI|TC62423 similar to UniRef100_A7PU21 Cluster: Chromosome...    50   6e-06

>gnl|LJGI|TC78881 similar to UniRef100_A7PHX9 Cluster: Chromosome chr13 scaffold_17,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_17, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (31%)
          Length = 1273

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 74/88 (84%), Gaps = 2/88 (2%)
 Strand = Plus / Plus

                                                                        
Query: 138  catgtttggatcggcttttctttattcagaatcaattctgaaattcagaagct--tccgc 195
            |||||||||||| |||| |||||  ||| ||||||||||||||  | ||||||  ||| |
Sbjct: 925  catgtttggatcagcttctctttcatcataatcaattctgaaacccggaagcttctcccc 984

                                        
Query: 196  aaaattgattctcactttagaatcaatt 223
            | |||||||||| |||| ||||||||||
Sbjct: 985  ataattgattctgacttcagaatcaatt 1012


>gnl|LJGI|TC71122 similar to UniRef100_A7QDW7 Cluster: Chromosome chr4 scaffold_83,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_83, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (45%)
          Length = 1224

 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 138  catgtttggatcggcttttctttattcagaatcaattctgaaattcagaagct 190
            |||||||||||  |||| ||||| |||| |||||||||||||| |||||||||
Sbjct: 970  catgtttggataagcttctctttcttcaaaatcaattctgaaactcagaagct 1022


>gnl|LJGI|TC57807 homologue to UniRef100_A7P5Z2 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 1012

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 163 tcagaatcaattctgaaattcagaagct 190
           ||||||||||||||||||||||||||||
Sbjct: 842 tcagaatcaattctgaaattcagaagct 815


>gnl|LJGI|BP071122 
          Length = 411

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 138 catgtttggatcggcttttctttattcagaatcaattctgaaattca 184
           ||||||||||||   || |||||| ||||||||||||||||||||||
Sbjct: 344 catgtttggatcaatttctctttaatcagaatcaattctgaaattca 390


>gnl|LJGI|TC73566 similar to UniRef100_A6AWY0 Cluster: Response regulator receiver
           domain protein; n=1; Vibrio parahaemolyticus AQ3810|Rep:
           Response regulator receiver domain protein - Vibrio
           parahaemolyticus AQ3810, partial (5%)
          Length = 863

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 138 catgtttggatcggcttttctttattcagaatcaattctgaaattcagaag 188
           ||||||||||||  ||||||||| ||||||||| ||||| |||| ||||||
Sbjct: 434 catgtttggatcaacttttctttcttcagaatctattctcaaatccagaag 384


>gnl|LJGI|TC62423 similar to UniRef100_A7PU21 Cluster: Chromosome chr7 scaffold_31,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_31, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 1050

 Score = 50.1 bits (25), Expect = 6e-06
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 138 catgtttggatcggcttttctttattcagaatcaattctgaaattcagaagct 190
           |||||||| ||| |||| | |||  |||||||||||||||||| |||||||||
Sbjct: 254 catgtttgaatcagcttctattttctcagaatcaattctgaaactcagaagct 202