Miyakogusa Predicted Gene

Lj2g3v1337470.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1337470.1 Non Chatacterized Hit- tr|I1KXV1|I1KXV1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,59.86,0,no
description,MIF4-like, type 1/2/3; ARM repeat,Armadillo-type fold;
seg,NULL; CELL CYCLE CONTROL P,gene.g41266.t1.1
         (882 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW629935 similar to UniRef100_A7QDS0 Cluster: Chromosom...    80   3e-14

>gnl|LJGI|BW629935 similar to UniRef100_A7QDS0 Cluster: Chromosome chr15 scaffold_82,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_82, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 477

 Score = 79.8 bits (40), Expect = 3e-14
 Identities = 211/268 (78%)
 Strand = Plus / Plus

                                                                       
Query: 210 gatcattgcactagagatgcttgatgttttgctcaagaagccgaccgacgacagtgttca 269
           ||||||||| |||||| ||||    ||||||||| ||||||| ||||| ||||||||| |
Sbjct: 1   gatcattgctctagagttgctcacggttttgctcgagaagcctaccgatgacagtgttga 60

                                                                       
Query: 270 agtagcggtttatttcgtcatggtatgtggttcagcactgcggaagcgctctcctaaagc 329
           |||||| |||  ||| |||| || ||||||||||  ||||| |  || ||| ||||||| 
Sbjct: 61  agtagctgttggttttgtcacggaatgtggttcaatactgcaggggctctcacctaaagg 120

                                                                       
Query: 330 ccttcgcggcgtcttcaagcgtcttaaagaaattcttcatgaaggagaagtagataaaag 389
           |||||  ||  ||||  ||||| ||   | ||||||||||||||||||| | || ||| |
Sbjct: 121 ccttcatggtatctttgagcgttttcgtggaattcttcatgaaggagaaattgacaaacg 180

                                                                       
Query: 390 tgttaagttttggattgagctcttgttctcgataagaaaaaccaagtttcaaggctatcc 449
           |||  |||| | ||||||    || ||  |  | |||||| |||||||||| ||||||||
Sbjct: 181 tgtgcagttcttgattgaaggtttatttgcagttagaaaagccaagtttcagggctatcc 240

                                       
Query: 450 agctattcggccggaactagaccttgtg 477
           |||| ||||||| |||||||||||||||
Sbjct: 241 agctgttcggcctgaactagaccttgtg 268