Miyakogusa Predicted Gene

Lj2g3v1279990.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1279990.1 CUFF.36684.1
         (630 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68940 similar to UniRef100_A7QEE4 Cluster: Chromosome...   121   6e-27
gnl|LJGI|TC63347 similar to UniRef100_A7QEE4 Cluster: Chromosome...   121   6e-27

>gnl|LJGI|TC68940 similar to UniRef100_A7QEE4 Cluster: Chromosome chr1 scaffold_84,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_84, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (64%)
          Length = 988

 Score =  121 bits (61), Expect = 6e-27
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                       
Query: 468 ccagccactcccacaagacttcttcaaatatgactggagggagcctttcaatcttcagaa 527
           ||||||||||||  ||||||||||||||||||| | |||||| |||||||||||||| ||
Sbjct: 220 ccagccactccctgaagacttcttcaaatatgatttgagggaacctttcaatcttcaaaa 279

                                                                       
Query: 528 ggggtggcttttgtggggaggagtaggacttgctggtgccctgattgtcattgcattgcc 587
           ||| ||||||||||||| |||||| ||||||  |||||||||   || |||||||||| |
Sbjct: 280 gggttggcttttgtgggcaggagttggacttattggtgccctagctgccattgcattgac 339

                                
Query: 588 aggtgctgccatgtccttctt 608
           ||| | |||  ||||||||||
Sbjct: 340 aggagttgctgtgtccttctt 360


>gnl|LJGI|TC63347 similar to UniRef100_A7QEE4 Cluster: Chromosome chr1 scaffold_84,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_84, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (46%)
          Length = 866

 Score =  121 bits (61), Expect = 6e-27
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                       
Query: 468 ccagccactcccacaagacttcttcaaatatgactggagggagcctttcaatcttcagaa 527
           ||||||||||||  ||||||||||||||||||| | |||||| |||||||||||||| ||
Sbjct: 525 ccagccactccctgaagacttcttcaaatatgatttgagggaacctttcaatcttcaaaa 584

                                                                       
Query: 528 ggggtggcttttgtggggaggagtaggacttgctggtgccctgattgtcattgcattgcc 587
           ||| ||||||||||||| |||||| ||||||  |||||||||   || |||||||||| |
Sbjct: 585 gggttggcttttgtgggcaggagttggacttattggtgccctagctgccattgcattgac 644

                                
Query: 588 aggtgctgccatgtccttctt 608
           ||| | |||  ||||||||||
Sbjct: 645 aggagttgctgtgtccttctt 665