Miyakogusa Predicted Gene
- Lj2g3v1277880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1277880.1 tr|G7KF80|G7KF80_MEDTR E3 ubiquitin-protein
ligase MARCH3 OS=Medicago truncatula GN=MTR_5g040650
PE=,85.62,0,DUF3675,Protein of unknown function DUF3675; RINGv,Zinc
finger, RING-CH-type; RING/U-box,NULL; seg,N,CUFF.36691.1
(873 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64868 similar to UniRef100_A7PDM1 Cluster: Chromosome... 1715 0.0
gnl|LJGI|BW607748 similar to UniRef100_A9CEI2 Cluster: Uncharact... 670 0.0
gnl|LJGI|DC597029 weakly similar to UniRef100_Q29L51 Cluster: GA... 252 3e-66
>gnl|LJGI|TC64868 similar to UniRef100_A7PDM1 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (67%)
Length = 1178
Score = 1715 bits (865), Expect = 0.0
Identities = 871/873 (99%)
Strand = Plus / Plus
Query: 1 atgagcgatcacctggtgctattcgttgaccaactcgtgcgccctgtccctgttgacccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 atgagcgatcacctggtgctattcgttgaccaactcgtgcgccctgtccctgttgacccc 157
Query: 61 gtcgcgcagcccgcccagctcccttctgagccctcgccgtctctcgatgctgccgccgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gtcgcgcagcccgcccagctcccttctgagccctcgccgtctctcgatgctgccgccgcg 217
Query: 121 gccgcgggtccttccgggaccgcaccgccggcggatcaagatgttgaggatgctgacgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gccgcgggtccttccgggaccgcaccgccggcggatcaagatgttgaggatgctgacgag 277
Query: 181 gatgagccgctgatccagatggcggaatgccgcatctgccaggaggaggatcaggtttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gatgagccgctgatccagatggcggaatgccgcatctgccaggaggaggatcaggtttcc 337
Query: 241 aacctggagacgccttgcgcctgcagcggcagccttaagtatgctcacagaaaatgtgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aacctggagacgccttgcgcctgcagcggcagccttaagtatgctcacagaaaatgtgtt 397
Query: 301 cagcattggtgcaatgagaaaggagacatcacttgtgagatatgtcatcagccctatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 cagcattggtgcaatgagaaaggagacatcacttgtgagatatgtcatcagccctatcaa 457
Query: 361 cctgggtataccgccccgccacctcgccctaatcctgatgaaactaccattgatatagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cctgggtataccgccccgccacctcgccctaatcctgatgaaactaccattgatatagga 517
Query: 421 ggagggtggacaatatctggcacgcctttggacttgcgtgatcctagacttctggcaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggagggtggacaatatctggcacgcctttggacttgcgtgatcctagacttctggcaatt 577
Query: 481 gcagaggcagaacgccaattcttggatgctgaatatgatgagtatgctgcttcaaatgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gcagaggcagaacgccaattcttggatgctgaatatgatgagtatgctgcttcaaatgcc 637
Query: 541 agcggagctgcattttgccgctcagctgctctaattttgatggcccttttgctcttgcgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 agcggagctgcattttgccgctcagctgctctaattttgatggcccttttgctcttgcgg 697
Query: 601 catgcattgtctgtcacagatggtgatgcttctgatgatgatccttctaactttttctct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 catgcattgtctgtcacagatggtgatgcttctgatgatgatccttctaactttttctct 757
Query: 661 cttttcttgcttcgagctgctggatttcttttaccttgctatattatggcttgggcaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 cttttcttgcttcgagctgctggatttcttttaccttgctatattatggcttgggcaatc 817
Query: 721 agtatcctgcaacgtcgacgacaaagacaggaagctgcagctttagcagccacccaagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 agtatcctgcaacgtcgacgacaaagacaggaagctgcagctttagcagccacccaagtt 877
Query: 781 gcttttgttctacaatctggacagcgtagaggtctacaatttgccatagcgacaggacca 840
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 878 gcttttgttctacaatctgggcagcgtagaggtctacaatttgccatagcgccaggacca 937
Query: 841 ccccccactgtacaccaggagcaagtgtagttt 873
|||||||||||||||||||||||||||||||||
Sbjct: 938 ccccccactgtacaccaggagcaagtgtagttt 970
>gnl|LJGI|BW607748 similar to UniRef100_A9CEI2 Cluster: Uncharacterized protein
At3g47550.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At3g47550.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (23%)
Length = 469
Score = 670 bits (338), Expect = 0.0
Identities = 341/342 (99%)
Strand = Plus / Plus
Query: 1 atgagcgatcacctggtgctattcgttgaccaactcgtgcgccctgtccctgttgacccc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 128 atgagcgatcacctggtgctattcgttgaccaactcgcgcgccctgtccctgttgacccc 187
Query: 61 gtcgcgcagcccgcccagctcccttctgagccctcgccgtctctcgatgctgccgccgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gtcgcgcagcccgcccagctcccttctgagccctcgccgtctctcgatgctgccgccgcg 247
Query: 121 gccgcgggtccttccgggaccgcaccgccggcggatcaagatgttgaggatgctgacgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gccgcgggtccttccgggaccgcaccgccggcggatcaagatgttgaggatgctgacgag 307
Query: 181 gatgagccgctgatccagatggcggaatgccgcatctgccaggaggaggatcaggtttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gatgagccgctgatccagatggcggaatgccgcatctgccaggaggaggatcaggtttcc 367
Query: 241 aacctggagacgccttgcgcctgcagcggcagccttaagtatgctcacagaaaatgtgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aacctggagacgccttgcgcctgcagcggcagccttaagtatgctcacagaaaatgtgtt 427
Query: 301 cagcattggtgcaatgagaaaggagacatcacttgtgagata 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cagcattggtgcaatgagaaaggagacatcacttgtgagata 469
>gnl|LJGI|DC597029 weakly similar to UniRef100_Q29L51 Cluster: GA18743-PA; n=1;
Drosophila pseudoobscura|Rep: GA18743-PA - Drosophila
pseudoobscura (Fruit fly), partial (3%)
Length = 312
Score = 252 bits (127), Expect = 3e-66
Identities = 190/211 (90%)
Strand = Plus / Plus
Query: 1 atgagcgatcacctggtgctattcgttgaccaactcgtgcgccctgtccctgttgacccc 60
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 102 atgagcgatcacctggtgctattcgttgaccaacgcgtgcgcccagtccctgttgacccc 161
Query: 61 gtcgcgcagcccgcccagctcccttctgagccctcgccgtctctcgatgctgccgccgcg 120
|||||||| |||| ||| ||||||||||||||||| ||| ||||||||||||||| |||
Sbjct: 162 gtcgcgcatcccgtccaactcccttctgagccctcatcgtgtctcgatgctgccgcggcg 221
Query: 121 gccgcgggtccttccgggaccgcaccgccggcggatcaagatgttgaggatgctgacgag 180
||||||||||||||||||| |||| | || | |||||| ||||||| ||||| ||||||
Sbjct: 222 gccgcgggtccttccgggagcgcatcaccaggtgatcaatatgttgaagatgcagacgag 281
Query: 181 gatgagccgctgatccagatggcggaatgcc 211
||||||| || ||| ||||||||||||||||
Sbjct: 282 gatgagcagcggatacagatggcggaatgcc 312