Miyakogusa Predicted Gene

Lj2g3v1267220.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1267220.1 Non Chatacterized Hit- tr|G7JXU6|G7JXU6_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,78.27,0,no
description,Tetratricopeptide-like helical; seg,NULL;
PPR_2,Pentatricopeptide repeat; PPR,Pentatr,CUFF.36629.1
         (2461 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80194 weakly similar to UniRef100_A7P2J6 Cluster: Chr...   617   e-175

>gnl|LJGI|TC80194 weakly similar to UniRef100_A7P2J6 Cluster: Chromosome chr1
            scaffold_5, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 312

 Score =  617 bits (311), Expect = e-175
 Identities = 311/311 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2124 ggggtactatactttgttatctaacatatatgcagaaggagggaactggtatgaatccag 2183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    ggggtactatactttgttatctaacatatatgcagaaggagggaactggtatgaatccag 61

                                                                        
Query: 2184 aaaagtgagatcaaggatggaaggaatgggcctgaagaaggtacctgggtacagcacaat 2243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   aaaagtgagatcaaggatggaaggaatgggcctgaagaaggtacctgggtacagcacaat 121

                                                                        
Query: 2244 tgagatagataggaaaatcttcagatttggagctggagatacttctgagttgctaatgaa 2303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  tgagatagataggaaaatcttcagatttggagctggagatacttctgagttgctaatgaa 181

                                                                        
Query: 2304 agaaatttacatgtttttagaaaaatttcaaagcttggcacaggaacaaggatgtgatgt 2363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  agaaatttacatgtttttagaaaaatttcaaagcttggcacaggaacaaggatgtgatgt 241

                                                                        
Query: 2364 agaatgctatagtacagtgtatggtactagatctagtgtatttcttgaggattgtagtgt 2423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  agaatgctatagtacagtgtatggtactagatctagtgtatttcttgaggattgtagtgt 301

                       
Query: 2424 tcataacttgc 2434
            |||||||||||
Sbjct: 302  tcataacttgc 312