Miyakogusa Predicted Gene

Lj2g3v1267210.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1267210.2 CUFF.36630.2
         (1011 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82140 similar to UniRef100_A7P2J5 Cluster: Chromosome...  1739   0.0  

>gnl|LJGI|TC82140 similar to UniRef100_A7P2J5 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (94%)
          Length = 1122

 Score = 1739 bits (877), Expect = 0.0
 Identities = 883/885 (99%)
 Strand = Plus / Plus

                                                                        
Query: 127  aagcacttggtttggaaccagtgtgtgcagagcttgttcttaatggggtacccttatgtg 186
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aagcacttggtttggaaccagtgtgtgcagagcttgttcttaatggggtacccttatgtg 60

                                                                        
Query: 187  tcaaggcgcggcgactttaaggctgaagcagcatggatgtttagagggggaggagagcag 246
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tcaaggcgcggcgactttaaggctgaagcagcatggatgtttagagggggaggagagcag 120

                                                                        
Query: 247  gagttggatgcaagtgtagagcacagtgaaagcgctaatgaggatatcttgatgttcttt 306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gagttggatgcaagtgtagagcacagtgaaagcgctaatgaggatatcttgatgttcttt 180

                                                                        
Query: 307  tttcagttagacttggccacaagagtacagtatgctttgaacatggagcagtatgacatt 366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181  tttcagttagacttggccacaagagtacagtatgctttgaacatggagcagtatggcatt 240

                                                                        
Query: 367  gcacagcagctgagaaataaactatctgaggttgaagaagatataatcaagcaacaacag 426
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gcacagcagctgagaaataaactatctgaggttgaagaagatataatcaagcaacaacag 300

                                                                        
Query: 427  tcaaaaaggggattgtcttcaaaaggtgaagcccaagataaaggtttaagtattatccgt 486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  tcaaaaaggggattgtcttcaaaaggtgaagcccaagataaaggtttaagtattatccgt 360

                                                                        
Query: 487  cttcgttcagaccttcagagtgctattgagaaagaggattatgccttggctgcagaatta 546
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  cttcgttcagaccttcagagtgctattgagaaagaggattatgccttggctgcagaatta 420

                                                                        
Query: 547  cgggataaaatttccaaacttgaagcagagtctctagctgcatcagccaaagctttggca 606
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  cgggataaaatttccaaacttgaagcagagtctctagctgcatcagccaaagctttggca 480

                                                                        
Query: 607  catgaaaatgcacaatacgccttccgcttggggcagaaagtaaggcataaaatatttggc 666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  catgaaaatgcacaatacgccttccgcttggggcagaaagtaaggcataaaatatttggc 540

                                                                        
Query: 667  tatacagctgtgatctgtggaatggatccagtgtgctctgaatcaagttcatggatggaa 726
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  tatacagctgtgatctgtggaatggatccagtgtgctctgaatcaagttcatggatggaa 600

                                                                        
Query: 727  aatgcagagattaagaagttgtctcgtggttccactcaacctttttatcagattcttgtt 786
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  aatgcagagattaagaagttgtctcgtggttccactcaacctttttatcagattcttgtt 660

                                                                        
Query: 787  gatgtacgtgctgaaccaaatctactggtggcatatgttgcagaggagaatcttctaacc 846
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  gatgtacgtgctgaaccaaatctactggtggcatatgttgcagaggagaatcttctaacc 720

                                                                        
Query: 847  cctgacaaaccagacatgggaaggtttgatcatccctacatctcttttctattctatgga 906
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  cctgacaaaccagacgtgggaaggtttgatcatccctacatctcttttctattctatgga 780

                                                                        
Query: 907  gtggattctgctggagatttcatcccaattaagcaactgcgggagaagtacaataaacca 966
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  gtggattctgctggagatttcatcccaattaagcaactgcgggagaagtacaataaacca 840

                                                         
Query: 967  cgtcatgaattacccactgacccaccaaacgatgaaagttgagca 1011
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  cgtcatgaattacccactgacccaccaaacgatgaaagttgagca 885