Miyakogusa Predicted Gene

Lj2g3v1253880.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1253880.1 Non Chatacterized Hit- tr|D7LZ33|D7LZ33_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,32.38,0.00003,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
no description,NULL; S-adenosyl-L-methionine-depend,CUFF.36598.1
         (777 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64869 similar to UniRef100_Q3EC77 Cluster: Uncharacte...   210   1e-53

>gnl|LJGI|TC64869 similar to UniRef100_Q3EC77 Cluster: Uncharacterized protein
            At2g03480.2; n=1; Arabidopsis thaliana|Rep:
            Uncharacterized protein At2g03480.2 - Arabidopsis
            thaliana (Mouse-ear cress), partial (32%)
          Length = 1165

 Score =  210 bits (106), Expect = 1e-53
 Identities = 175/198 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgctactagaagataatcaatttgcttttcagtcggaggatggactgatctatgatggt 60
            ||||| |||||||| |||||| |||| ||||| |||||||||||  |||||| ||| || 
Sbjct: 921  atgctgctagaagagaatcaaattgcctttcactcggaggatgggttgatctttgacgga 980

                                                                        
Query: 61   gtgaaagattattctcaccaaattgctgagatgatagggttgggaagtgacactgaattt 120
            ||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||| |||
Sbjct: 981  gtgaaagattattctcgtcaacttgctgagatgatagggttaggaagtgacactgagttt 1040

                                                                        
Query: 121  cctcaggctggtgttcgcaccatactggacattaattgtggatttggtagctttggagct 180
            | ||||||||||||||| || ||||| || ||||||||||||||||| ||||||||||||
Sbjct: 1041 catcaggctggtgttcgaactatactagatattaattgtggatttgggagctttggagct 1100

                              
Query: 181  catttgttatccctgaaa 198
            |||||||| || ||||||
Sbjct: 1101 catttgttgtcactgaaa 1118