Miyakogusa Predicted Gene
- Lj2g3v1252780.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1252780.2 Non Chatacterized Hit- tr|I1QBZ3|I1QBZ3_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,44.86,3e-19,Possibly involved in carbohydrate binding,X8;
seg,NULL; X8,X8; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.36637.2
(624 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61089 weakly similar to UniRef100_A7PDB3 Cluster: Chr... 848 0.0
gnl|LJGI|TC58701 weakly similar to UniRef100_A7PDB3 Cluster: Chr... 848 0.0
gnl|LJGI|TC59177 similar to UniRef100_A7PDB3 Cluster: Chromosome... 737 0.0
gnl|LJGI|BP032177 homologue to UniRef100_A2QJ31 Cluster: Contig ... 54 1e-06
>gnl|LJGI|TC61089 weakly similar to UniRef100_A7PDB3 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (65%)
Length = 1256
Score = 848 bits (428), Expect = 0.0
Identities = 437/440 (99%)
Strand = Plus / Plus
Query: 1 atggctctaatggtgtattttgtgcttttcttagccctgactggctattcaagtgctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atggctctaatggtgtattttgtgcttttcttagccctgactggctattcaagtgctctt 279
Query: 61 tactgtatatgtaaagatggtgtgggagatcaagctcttcagaaagcaatagattatgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tactgtatatgtaaagatggtgtgggagatcaagctcttcagaaagcaatagattatgcc 339
Query: 121 tgtggtgctggagctgattgcacacctatttccacaaatggaggctgtttccaacccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgtggtgctggagctgattgcacacctatttccacaaatggaggctgtttccaacccaac 399
Query: 181 actgtgaaggatcactgcaactatgctgtcaatagctatttccagaaaaagggtcagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 actgtgaaggatcactgcaactatgctgtcaatagctatttccagaaaaagggtcagatt 459
Query: 241 cagggaagctgtgattttgctggtgctgccattaccagtccaacagcacctactgcatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cagggaagctgtgattttgctggtgctgccattaccagtccaacagcacctactgcatca 519
Query: 301 tcttcatgtgttttccccacaagccctggcactacagggacagggacaagcacaacccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tcttcatgtgttttccccacaagccctggcactacagggacagggacaagcacaacccca 579
Query: 361 tcaaccaccacaccaagcacaaccccctctaccttaactcctcctactagcacaggcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tcaaccaccacaccaagcacaaccccctctaccttaactcctcctactagcacaggcaca 639
Query: 421 ggcataggcactggtacagg 440
|||| |||||| || |||||
Sbjct: 640 ggcacaggcacaggcacagg 659
Score = 414 bits (209), Expect = e-115
Identities = 212/213 (99%)
Strand = Plus / Plus
Query: 412 acaggcacaggcataggcactggtacaggttcaaccacaggtactggcattggcacagga 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 acaggcacaggcataggcactggtacaggttcaaccacaggtactggcattggcacagga 732
Query: 472 acaggcacaaccacagggagtcctaatgtatttggaattagtccaacatcatcaactggt 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 acaggcacaaccacagggagtcctaatgtatttggaattagtccaacatcatcaactggt 792
Query: 532 actggtagcttcaatgacaatggaggggttcaattgaaaggcacatttgtgttactgtta 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 793 actggtagcttcaatgacaatggaggggttcaattgaaaggcacatttgtgttactgcta 852
Query: 592 tctcttgttgttgctagcttatggctagcttga 624
|||||||||||||||||||||||||||||||||
Sbjct: 853 tctcttgttgttgctagcttatggctagcttga 885
>gnl|LJGI|TC58701 weakly similar to UniRef100_A7PDB3 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (65%)
Length = 1260
Score = 848 bits (428), Expect = 0.0
Identities = 437/440 (99%)
Strand = Plus / Plus
Query: 1 atggctctaatggtgtattttgtgcttttcttagccctgactggctattcaagtgctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggctctaatggtgtattttgtgcttttcttagccctgactggctattcaagtgctctt 189
Query: 61 tactgtatatgtaaagatggtgtgggagatcaagctcttcagaaagcaatagattatgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tactgtatatgtaaagatggtgtgggagatcaagctcttcagaaagcaatagattatgcc 249
Query: 121 tgtggtgctggagctgattgcacacctatttccacaaatggaggctgtttccaacccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tgtggtgctggagctgattgcacacctatttccacaaatggaggctgtttccaacccaac 309
Query: 181 actgtgaaggatcactgcaactatgctgtcaatagctatttccagaaaaagggtcagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 actgtgaaggatcactgcaactatgctgtcaatagctatttccagaaaaagggtcagatt 369
Query: 241 cagggaagctgtgattttgctggtgctgccattaccagtccaacagcacctactgcatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cagggaagctgtgattttgctggtgctgccattaccagtccaacagcacctactgcatca 429
Query: 301 tcttcatgtgttttccccacaagccctggcactacagggacagggacaagcacaacccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tcttcatgtgttttccccacaagccctggcactacagggacagggacaagcacaacccca 489
Query: 361 tcaaccaccacaccaagcacaaccccctctaccttaactcctcctactagcacaggcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tcaaccaccacaccaagcacaaccccctctaccttaactcctcctactagcacaggcaca 549
Query: 421 ggcataggcactggtacagg 440
|||| |||||| || |||||
Sbjct: 550 ggcacaggcacaggcacagg 569
Score = 422 bits (213), Expect = e-117
Identities = 213/213 (100%)
Strand = Plus / Plus
Query: 412 acaggcacaggcataggcactggtacaggttcaaccacaggtactggcattggcacagga 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 acaggcacaggcataggcactggtacaggttcaaccacaggtactggcattggcacagga 696
Query: 472 acaggcacaaccacagggagtcctaatgtatttggaattagtccaacatcatcaactggt 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 acaggcacaaccacagggagtcctaatgtatttggaattagtccaacatcatcaactggt 756
Query: 532 actggtagcttcaatgacaatggaggggttcaattgaaaggcacatttgtgttactgtta 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 actggtagcttcaatgacaatggaggggttcaattgaaaggcacatttgtgttactgtta 816
Query: 592 tctcttgttgttgctagcttatggctagcttga 624
|||||||||||||||||||||||||||||||||
Sbjct: 817 tctcttgttgttgctagcttatggctagcttga 849
>gnl|LJGI|TC59177 similar to UniRef100_A7PDB3 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 918
Score = 737 bits (372), Expect = 0.0
Identities = 375/376 (99%)
Strand = Plus / Plus
Query: 1 atggctctaatggtgtattttgtgcttttcttagccctgactggctattcaagtgctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atggctctaatggtgtattttgtgcttttcttagccctgactggctattcaagtgctctt 292
Query: 61 tactgtatatgtaaagatggtgtgggagatcaagctcttcagaaagcaatagattatgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tactgtatatgtaaagatggtgtgggagatcaagctcttcagaaagcaatagattatgcc 352
Query: 121 tgtggtgctggagctgattgcacacctatttccacaaatggaggctgtttccaacccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tgtggtgctggagctgattgcacacctatttccacaaatggaggctgtttccaacccaac 412
Query: 181 actgtgaaggatcactgcaactatgctgtcaatagctatttccagaaaaagggtcagatt 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 actgtgaaggatcactgcagctatgctgtcaatagctatttccagaaaaagggtcagatt 472
Query: 241 cagggaagctgtgattttgctggtgctgccattaccagtccaacagcacctactgcatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cagggaagctgtgattttgctggtgctgccattaccagtccaacagcacctactgcatca 532
Query: 301 tcttcatgtgttttccccacaagccctggcactacagggacagggacaagcacaacccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tcttcatgtgttttccccacaagccctggcactacagggacagggacaagcacaacccca 592
Query: 361 tcaaccaccacaccaa 376
||||||||||||||||
Sbjct: 593 tcaaccaccacaccaa 608
>gnl|LJGI|BP032177 homologue to UniRef100_A2QJ31 Cluster: Contig An04c0180 complete
genome; n=1; Aspergillus niger|Rep: Contig An04c0180
complete, partial (0%)
Length = 519
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 475 ggcacaaccacagggagtcctaatgtatttggaattagtccaacatcatcaactggtact 534
||||| || ||||| ||||||| ||| |||||||| ||||||||| | |||||||||||
Sbjct: 497 ggcactacaacaggtagtcctactgtgtttggaataagtccaacagctacaactggtact 438
Query: 535 ggt 537
|||
Sbjct: 437 ggt 435