Miyakogusa Predicted Gene
- Lj2g3v1252630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1252630.1 Non Chatacterized Hit- tr|I1LPX7|I1LPX7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.28,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; seg,NULL;
PPR,Pentatricopeptide repea,CUFF.36579.1
(2199 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV767789 similar to UniRef100_Q89S39 Cluster: Bll2566 p... 741 0.0
gnl|LJGI|AV421790 492 e-138
gnl|LJGI|AV776874 weakly similar to UniRef100_Q7X9F7 Cluster: Le... 76 1e-12
>gnl|LJGI|AV767789 similar to UniRef100_Q89S39 Cluster: Bll2566 protein; n=1;
Bradyrhizobium japonicum|Rep: Bll2566 protein -
Bradyrhizobium japonicum, partial (5%)
Length = 546
Score = 741 bits (374), Expect = 0.0
Identities = 388/395 (98%)
Strand = Plus / Minus
Query: 1795 ggtcaatacatggaagcaagagatgtaatatctgaatttgggaagattggattgcaccca 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ggtcaatacatggaagcaagagatgtaatatctgaatttgggaagattggattgcaccca 487
Query: 1855 acagtgatgacttacaatatgctgatgaatgcgtatgcacgaggagggcaacactcgaag 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 acagtgatgacttacaatatgctgatgaatgcgtatgcacgaggagggcaacactcgaag 427
Query: 1915 ctgccgcagttgttgaaagagatggcagctcttaacttaaaaccagattctgtaacttac 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ctgccgcagttgttgaaagagatggcagctcttaacttaaaaccagattctgtaacttac 367
Query: 1975 tcaactatgatatacgcgtttgtccgtgttcgagacttcaggcgggcannnnnnnatcac 2034
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 366 tcaactatgatatacgcgtttgtccgtgttcgagacttcaggcgggcatttttttatcac 307
Query: 2035 aagcagatgatcaagagtgggcaggtgatggatgttgattcttatcagaaacttcgggca 2094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aagcagatgatcaagagtgggcaggtgatggatgttgattcttatcagaaacttcgggca 247
Query: 2095 attctggatgtcaaagctgcagcaaaaataaggaaggataggagagccttgcttggtata 2154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 attctggatgtcaaagctgcagcaaaaataaggaaggataggagagccttgcttggtata 187
Query: 2155 gttaaaagtaagatgggcgttatgcaagaaaagag 2189
|||||||||||||||||||||||||||||||||||
Sbjct: 186 gttaaaagtaagatgggcgttatgcaagaaaagag 152
>gnl|LJGI|AV421790
Length = 248
Score = 492 bits (248), Expect = e-138
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1298 ttgaaatgaaagctaaaaatgttaaacccaccgcagccacattcaacattctaatgcatg 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaaatgaaagctaaaaatgttaaacccaccgcagccacattcaacattctaatgcatg 60
Query: 1358 catacagcagaagaatgcaacctaagattgtggagaatctactggcagaaatgcaggata 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catacagcagaagaatgcaacctaagattgtggagaatctactggcagaaatgcaggata 120
Query: 1418 ttggtttgaaaccaactgcaaattcatatacttgtctaatcagtgcatacgggaggcaga 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttggtttgaaaccaactgcaaattcatatacttgtctaatcagtgcatacgggaggcaga 180
Query: 1478 aaaagatgagtgacatggcagcagatgcattcttgaagatgaagaaagttggtataaaac 1537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaagatgagtgacatggcagcagatgcattcttgaagatgaagaaagttggtataaaac 240
Query: 1538 ccacttca 1545
||||||||
Sbjct: 241 ccacttca 248
>gnl|LJGI|AV776874 weakly similar to UniRef100_Q7X9F7 Cluster: Lectin; n=1; Galega
orientalis|Rep: Lectin - Galega orientalis, partial (7%)
Length = 588
Score = 75.8 bits (38), Expect = 1e-12
Identities = 100/122 (81%), Gaps = 9/122 (7%)
Strand = Plus / Plus
Query: 711 ggttctggaagtacttgggaaggagcgtcttctggtgtgttgtttgtatttctttcagtg 770
|||||||||| |||| |||||||||| | ||||||||||||||||| |||||| ||||
Sbjct: 276 ggttctggaaatactagggaaggagcaccgtctggtgtgttgtttgttattctttaagtg 335
Query: 771 gatgagggcgcaggaaccatcacttgttactcctcgggcatgtaccgtgttgtttccgtt 830
||||||| | || ||||||| |||||||||||||||| ||||||||||| ||
Sbjct: 336 gatgaggtcacatgaaccat---------ctcctcgggcatgtactgtgttgtttccatt 386
Query: 831 gt 832
||
Sbjct: 387 gt 388
Score = 71.9 bits (36), Expect = 2e-11
Identities = 46/48 (95%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 593 tgcctgagggtgttgtgggggaaattgttcagcttgcaaggaacttgc 640
||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 200 tgcctgacggtgttgtgggg-aaattgttcagcttgcaaggaacttgc 246