Miyakogusa Predicted Gene

Lj2g3v1252610.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1252610.2 tr|Q10Q12|Q10Q12_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=LOC_Os03g11500 PE=4
SV=1,45.45,6e-17,seg,NULL; DUF647,Protein of unknown function DUF647;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,Prot,CUFF.36572.2
         (1320 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80811 similar to UniRef100_A7P2F8 Cluster: Chromosome...   254   1e-66
gnl|LJGI|AV777690 similar to UniRef100_A7P2F7 Cluster: Chromosom...   170   1e-41

>gnl|LJGI|TC80811 similar to UniRef100_A7P2F8 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (35%)
          Length = 508

 Score =  254 bits (128), Expect = 1e-66
 Identities = 128/128 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1193 attcagaaggccaaatgtggatggaaaatcagtatgaagtgtttattcagaagctcaagt 1252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    attcagaaggccaaatgtggatggaaaatcagtatgaagtgtttattcagaagctcaagt 60

                                                                        
Query: 1253 cattaggttggaaaacagaacgtcttctatcacctataatatggagagcacactggattt 1312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   cattaggttggaaaacagaacgtcttctatcacctataatatggagagcacactggattt 120

                    
Query: 1313 atgaaccg 1320
            ||||||||
Sbjct: 121  atgaaccg 128


>gnl|LJGI|AV777690 similar to UniRef100_A7P2F7 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 578

 Score =  170 bits (86), Expect = 1e-41
 Identities = 92/94 (97%)
 Strand = Plus / Minus

                                                                       
Query: 784 gcaaactaccgagctgttcgatgcctggcattgacctcgttaaacccggaaagaagctct 843
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gcaaactaccgagctgttcgatgcctggcattgacctcgttaaacccggaaagaagctct 252

                                             
Query: 844 attcttttgcaccatttcatggagactggccaag 877
            ||||||||||||||||||||||||| |||||||
Sbjct: 251 gttcttttgcaccatttcatggagaccggccaag 218