Miyakogusa Predicted Gene
- Lj2g3v1252590.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1252590.3 Non Chatacterized Hit- tr|J3NB42|J3NB42_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB11G0,25,2e-18,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR_2,Pentatricopepti,CUFF.36571.3
(1345 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS349031 similar to UniRef100_A7P2F5 Cluster: Chromosom... 1166 0.0
gnl|LJGI|FS322440 weakly similar to UniRef100_A7P2F5 Cluster: Ch... 58 1e-07
>gnl|LJGI|FS349031 similar to UniRef100_A7P2F5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 588
Score = 1166 bits (588), Expect = 0.0
Identities = 588/588 (100%)
Strand = Plus / Minus
Query: 272 atttagcttctatggagtcaacgattctcaggagtctgagtgatgaagacaggaaagatt 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atttagcttctatggagtcaacgattctcaggagtctgagtgatgaagacaggaaagatt 529
Query: 332 ggaattttggaggagaaacgttctgtgcagtagttaaggaatatcttcggaagggaaata 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ggaattttggaggagaaacgttctgtgcagtagttaaggaatatcttcggaagggaaata 469
Query: 392 tcaagggtttagctaatctgatcaacgaagctcagaagttagaaccttctaacattaaag 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tcaagggtttagctaatctgatcaacgaagctcagaagttagaaccttctaacattaaag 409
Query: 452 ctgataactctataggttatggtattgttaatgcttgtgttagtatgggattatcagaca 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ctgataactctataggttatggtattgttaatgcttgtgttagtatgggattatcagaca 349
Query: 512 aagctcacagcattcttgatgaaatgaatgctctgggaggctcagtaggtcttggggtct 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aagctcacagcattcttgatgaaatgaatgctctgggaggctcagtaggtcttggggtct 289
Query: 572 atatacctatcttgaaggcttactgcaaagaaaatcgaactgctgaggctactatattgg 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 atatacctatcttgaaggcttactgcaaagaaaatcgaactgctgaggctactatattgg 229
Query: 632 tgatggagattagtagttcaggtcttcagttggatgtggaaacctatgatgctctcatag 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tgatggagattagtagttcaggtcttcagttggatgtggaaacctatgatgctctcatag 169
Query: 692 aaacatccatgtccagccaagattttcagtcagcgttttccctgtttagggacatgaggg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 aaacatccatgtccagccaagattttcagtcagcgttttccctgtttagggacatgaggg 109
Query: 752 aggcaagggttcctgacttgaaagggagttacttgactataatgacgggtttgatggaga 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 aggcaagggttcctgacttgaaagggagttacttgactataatgacgggtttgatggaga 49
Query: 812 atcatcgacctgagttgatggcagctttcttagatgaggtggttgggg 859
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atcatcgacctgagttgatggcagctttcttagatgaggtggttgggg 1
>gnl|LJGI|FS322440 weakly similar to UniRef100_A7P2F5 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 717
Score = 58.0 bits (29), Expect = 1e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 atgaaacctgatgttgctgcttgtaatgc 29
|||||||||||||||||||||||||||||
Sbjct: 689 atgaaacctgatgttgctgcttgtaatgc 717