Miyakogusa Predicted Gene
- Lj2g3v1252590.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1252590.2 Non Chatacterized Hit- tr|I1JIZ8|I1JIZ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19205
PE,24.73,4e-18,PPR,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; seg,NULL; PPR_2,Penta,CUFF.36571.2
(1875 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS349031 similar to UniRef100_A7P2F5 Cluster: Chromosom... 1166 0.0
gnl|LJGI|FS322440 weakly similar to UniRef100_A7P2F5 Cluster: Ch... 999 0.0
>gnl|LJGI|FS349031 similar to UniRef100_A7P2F5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (29%)
Length = 588
Score = 1166 bits (588), Expect = 0.0
Identities = 588/588 (100%)
Strand = Plus / Minus
Query: 803 atttagcttctatggagtcaacgattctcaggagtctgagtgatgaagacaggaaagatt 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atttagcttctatggagtcaacgattctcaggagtctgagtgatgaagacaggaaagatt 529
Query: 863 ggaattttggaggagaaacgttctgtgcagtagttaaggaatatcttcggaagggaaata 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ggaattttggaggagaaacgttctgtgcagtagttaaggaatatcttcggaagggaaata 469
Query: 923 tcaagggtttagctaatctgatcaacgaagctcagaagttagaaccttctaacattaaag 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tcaagggtttagctaatctgatcaacgaagctcagaagttagaaccttctaacattaaag 409
Query: 983 ctgataactctataggttatggtattgttaatgcttgtgttagtatgggattatcagaca 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ctgataactctataggttatggtattgttaatgcttgtgttagtatgggattatcagaca 349
Query: 1043 aagctcacagcattcttgatgaaatgaatgctctgggaggctcagtaggtcttggggtct 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aagctcacagcattcttgatgaaatgaatgctctgggaggctcagtaggtcttggggtct 289
Query: 1103 atatacctatcttgaaggcttactgcaaagaaaatcgaactgctgaggctactatattgg 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 atatacctatcttgaaggcttactgcaaagaaaatcgaactgctgaggctactatattgg 229
Query: 1163 tgatggagattagtagttcaggtcttcagttggatgtggaaacctatgatgctctcatag 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tgatggagattagtagttcaggtcttcagttggatgtggaaacctatgatgctctcatag 169
Query: 1223 aaacatccatgtccagccaagattttcagtcagcgttttccctgtttagggacatgaggg 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 aaacatccatgtccagccaagattttcagtcagcgttttccctgtttagggacatgaggg 109
Query: 1283 aggcaagggttcctgacttgaaagggagttacttgactataatgacgggtttgatggaga 1342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 aggcaagggttcctgacttgaaagggagttacttgactataatgacgggtttgatggaga 49
Query: 1343 atcatcgacctgagttgatggcagctttcttagatgaggtggttgggg 1390
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atcatcgacctgagttgatggcagctttcttagatgaggtggttgggg 1
>gnl|LJGI|FS322440 weakly similar to UniRef100_A7P2F5 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 717
Score = 999 bits (504), Expect = 0.0
Identities = 504/504 (100%)
Strand = Plus / Plus
Query: 1 atggccaaaagagttctcacctttcttccccatagacaattctcatcaatacctgaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atggccaaaagagttctcacctttcttccccatagacaattctcatcaatacctgaaatt 115
Query: 61 ccaagcctttactccttccttcaaccttctgtgtttgctctcaacagaaacaggacacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ccaagcctttactccttccttcaaccttctgtgtttgctctcaacagaaacaggacacaa 175
Query: 121 cccatttgtgaagagccccaaaagcttccaacttcacccccaaagtccctttccctcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 cccatttgtgaagagccccaaaagcttccaacttcacccccaaagtccctttccctcacc 235
Query: 181 cctgaccaagtctccacactccaaaccactcttcacaagtccctcatcaccagtgacact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 cctgaccaagtctccacactccaaaccactcttcacaagtccctcatcaccagtgacact 295
Query: 241 gatgaagcttggaagtccttcaagtctcttacctctcatcaagccttcccacctaaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gatgaagcttggaagtccttcaagtctcttacctctcatcaagccttcccacctaaaccc 355
Query: 301 ctcaccaattctctcattactcatctttcatcccttggtgacattcacaacctcaagagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctcaccaattctctcattactcatctttcatcccttggtgacattcacaacctcaagagg 415
Query: 361 gcttttgcttctgctgtttttctcatggagaggaatccaatggtgctggagtctgaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gcttttgcttctgctgtttttctcatggagaggaatccaatggtgctggagtctgaaaca 475
Query: 421 atacatgccatgcttgattccatgaagggtgccaacactgctgcccctgcttttgctctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atacatgccatgcttgattccatgaagggtgccaacactgctgcccctgcttttgctctt 535
Query: 481 gtcaggtgtatgttcaagaacagg 504
||||||||||||||||||||||||
Sbjct: 536 gtcaggtgtatgttcaagaacagg 559
Score = 117 bits (59), Expect = 3e-25
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 502 agggttgctttggatgagaagttggagttcatgaaacctgatgttgctgcttgtaatgc 560
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 agggttgctttggatgagaagttggagttcatgaaacctgatgttgctgcttgtaatgc 717