Miyakogusa Predicted Gene
- Lj2g3v1252580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1252580.1 tr|G7JY14|G7JY14_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,77.71,0,PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR_3,Pentatricopeptide repeat;
SUBFAM,CUFF.36570.1
(1977 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322440 weakly similar to UniRef100_A7P2F5 Cluster: Ch... 1312 0.0
gnl|LJGI|FS349031 similar to UniRef100_A7P2F5 Cluster: Chromosom... 1166 0.0
>gnl|LJGI|FS322440 weakly similar to UniRef100_A7P2F5 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 717
Score = 1312 bits (662), Expect = 0.0
Identities = 662/662 (100%)
Strand = Plus / Plus
Query: 1 atggccaaaagagttctcacctttcttccccatagacaattctcatcaatacctgaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atggccaaaagagttctcacctttcttccccatagacaattctcatcaatacctgaaatt 115
Query: 61 ccaagcctttactccttccttcaaccttctgtgtttgctctcaacagaaacaggacacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ccaagcctttactccttccttcaaccttctgtgtttgctctcaacagaaacaggacacaa 175
Query: 121 cccatttgtgaagagccccaaaagcttccaacttcacccccaaagtccctttccctcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 cccatttgtgaagagccccaaaagcttccaacttcacccccaaagtccctttccctcacc 235
Query: 181 cctgaccaagtctccacactccaaaccactcttcacaagtccctcatcaccagtgacact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 cctgaccaagtctccacactccaaaccactcttcacaagtccctcatcaccagtgacact 295
Query: 241 gatgaagcttggaagtccttcaagtctcttacctctcatcaagccttcccacctaaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gatgaagcttggaagtccttcaagtctcttacctctcatcaagccttcccacctaaaccc 355
Query: 301 ctcaccaattctctcattactcatctttcatcccttggtgacattcacaacctcaagagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctcaccaattctctcattactcatctttcatcccttggtgacattcacaacctcaagagg 415
Query: 361 gcttttgcttctgctgtttttctcatggagaggaatccaatggtgctggagtctgaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gcttttgcttctgctgtttttctcatggagaggaatccaatggtgctggagtctgaaaca 475
Query: 421 atacatgccatgcttgattccatgaagggtgccaacactgctgcccctgcttttgctctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atacatgccatgcttgattccatgaagggtgccaacactgctgcccctgcttttgctctt 535
Query: 481 gtcaggtgtatgttcaagaacaggtattttgtgccttttgccatgtggggtaatgtgctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gtcaggtgtatgttcaagaacaggtattttgtgccttttgccatgtggggtaatgtgctt 595
Query: 541 gttgagattattaggaaaagtggtaaccttgctgctttcttgcctgtttttgaagagagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gttgagattattaggaaaagtggtaaccttgctgctttcttgcctgtttttgaagagagc 655
Query: 601 tgtagggttgctttggatgagaagttggagttcatgaaacctgatgttgctgcttgtaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tgtagggttgctttggatgagaagttggagttcatgaaacctgatgttgctgcttgtaat 715
Query: 661 gc 662
||
Sbjct: 716 gc 717
>gnl|LJGI|FS349031 similar to UniRef100_A7P2F5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (29%)
Length = 588
Score = 1166 bits (588), Expect = 0.0
Identities = 588/588 (100%)
Strand = Plus / Minus
Query: 905 atttagcttctatggagtcaacgattctcaggagtctgagtgatgaagacaggaaagatt 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atttagcttctatggagtcaacgattctcaggagtctgagtgatgaagacaggaaagatt 529
Query: 965 ggaattttggaggagaaacgttctgtgcagtagttaaggaatatcttcggaagggaaata 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ggaattttggaggagaaacgttctgtgcagtagttaaggaatatcttcggaagggaaata 469
Query: 1025 tcaagggtttagctaatctgatcaacgaagctcagaagttagaaccttctaacattaaag 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tcaagggtttagctaatctgatcaacgaagctcagaagttagaaccttctaacattaaag 409
Query: 1085 ctgataactctataggttatggtattgttaatgcttgtgttagtatgggattatcagaca 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ctgataactctataggttatggtattgttaatgcttgtgttagtatgggattatcagaca 349
Query: 1145 aagctcacagcattcttgatgaaatgaatgctctgggaggctcagtaggtcttggggtct 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aagctcacagcattcttgatgaaatgaatgctctgggaggctcagtaggtcttggggtct 289
Query: 1205 atatacctatcttgaaggcttactgcaaagaaaatcgaactgctgaggctactatattgg 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 atatacctatcttgaaggcttactgcaaagaaaatcgaactgctgaggctactatattgg 229
Query: 1265 tgatggagattagtagttcaggtcttcagttggatgtggaaacctatgatgctctcatag 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tgatggagattagtagttcaggtcttcagttggatgtggaaacctatgatgctctcatag 169
Query: 1325 aaacatccatgtccagccaagattttcagtcagcgttttccctgtttagggacatgaggg 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 aaacatccatgtccagccaagattttcagtcagcgttttccctgtttagggacatgaggg 109
Query: 1385 aggcaagggttcctgacttgaaagggagttacttgactataatgacgggtttgatggaga 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 aggcaagggttcctgacttgaaagggagttacttgactataatgacgggtttgatggaga 49
Query: 1445 atcatcgacctgagttgatggcagctttcttagatgaggtggttgggg 1492
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atcatcgacctgagttgatggcagctttcttagatgaggtggttgggg 1