Miyakogusa Predicted Gene
- Lj2g3v1242400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1242400.1 tr|G7JY34|G7JY34_MEDTR Serine/threonine protein
kinase OS=Medicago truncatula GN=MTR_5g045190 PE=4
S,81.16,0,Pkinase,Protein kinase, catalytic domain;
PROTEIN_KINASE_DOM,Protein kinase, catalytic domain;
PROTE,CUFF.36566.1
(2520 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC597280 homologue to UniRef100_A7P2E2 Cluster: Chromos... 1027 0.0
gnl|LJGI|TC64171 similar to UniRef100_A7P2E2 Cluster: Chromosome... 955 0.0
gnl|LJGI|TC60750 similar to UniRef100_A7P2E2 Cluster: Chromosome... 906 0.0
gnl|LJGI|AV771507 similar to UniRef100_A7P2E2 Cluster: Chromosom... 262 1e-68
gnl|LJGI|AV775101 111 2e-23
>gnl|LJGI|DC597280 homologue to UniRef100_A7P2E2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (22%)
Length = 526
Score = 1027 bits (518), Expect = 0.0
Identities = 524/526 (99%)
Strand = Plus / Plus
Query: 1029 tgaagaaccactggatgaagttcaaatagcatatatctgtagagaagcattaaagggact 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagaaccactggatgaagttcaaatagcatatatctgtagagaagcattaaagggact 60
Query: 1089 tgactatttgcactcgatttttaaagttcatagagacattaaaggtgggaatatcttatt 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgactatttgcactcgatttttaaagttcatagagacattaaaggtgggaatatcttatt 120
Query: 1149 aacggaacaaggagatgtcaagctaggagactttggtgttgctgcccagcttacaaggac 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacggaacaaggagatgtcaagctaggagactttggtgttgctgcccagcttacaaggac 180
Query: 1209 tatgtcaaagcgcaatacgttcattggaactcctcattggatggctccggaagtcattca 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatgtcaaagcgcaatacgttcattggaactcctcattggatggctccggaagtcattca 240
Query: 1269 ggaaagtcgctatgatggaaaggtagatgtttgggctcttggtgtgtctgcaattgaaat 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaaagtcgctatgatggaaaggtagatgtttgggctcttggtgtgtctgcaattgaaat 300
Query: 1329 ggccgagggtgctcctccaagatcatcagtgcatccaatgagggttatattcatgatatc 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggccgagggtgctcctccaagatcatcagtgcatccaatgagggttatattcatgatatc 360
Query: 1389 catcgaaccagctccgatgcttgaggataaagaaaaatggtctttatatttccatgattt 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catcgaaccagctccgatgcttgaggataaagaaaaatggtctttatatttccatgattt 420
Query: 1449 tgttgcaaagtgcctaaccaaagaacctcgactccgccctactgcatctgagatgttgaa 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgttgcaaagtgcctaaccaaagaacctcgactccgccctactgcatctgagatgttgaa 480
Query: 1509 gcacaaattctttgaaaaatggaaatctggatctgctgcaatgttg 1554
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 gcacaaattctttcgaaaatggaaatctggatctgctgcaatgttg 526
>gnl|LJGI|TC64171 similar to UniRef100_A7P2E2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 823
Score = 955 bits (482), Expect = 0.0
Identities = 526/548 (95%)
Strand = Plus / Plus
Query: 1 atggatcggaactcgttctccccccgaacccggaaaacccgacccaaatctgacatatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 atggatcggaactcgttctccccccgaacccggaaaacccgacccaaatctgacatatac 79
Query: 61 tccaccgtcgtggtccatgacgacggcgacgacgacgccgatgctgaccggcggcggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 tccaccgtcgtggtccatgacgacggcgacgacgacgccgatgctgaccggcggcggaaa 139
Query: 121 cccggagtcacggaagttcaggacgatccatacgcgacaatggtgttcaaagacaacggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cccggagtcacggaagttcaggacgatccatacgcgacaatggtgttcaaagacaacggc 199
Query: 181 cnnnnnnnnnnnnnnnnnnnnnnagattcctctcttcctccgctactcaagcgccttccc 240
| |||||||||||||||||||||||||||||||||||||
Sbjct: 200 cacgacgacgacgatgacgacgaagattcctctcttcctccgctactcaagcgccttccc 259
Query: 241 aaggacttcggcggcggagcagggctggactatgaggacgacgacgaagacgattactcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaggacttcggcggcggagcagggctggactatgaggacgacgacgaagacgattactcc 319
Query: 301 ggcgacttcggcaccatgatcgtgaagactgaccggagccagcatcgcgatcggtcttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggcgacttcggcaccatgatcgtgaagactgaccggagccagcatcgcgatcggtcttct 379
Query: 361 tcttcttccggattgggttcgccggcggcgggctcgacctggaaagctcggagctcttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcttcttccggattgggttcgccggcggcgggctcgacctggaaagctcggagctcttct 439
Query: 421 attttgaataagttcagggaaggggacgacgacgaacgcgacggtgacggcggcggcgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attttgaataagttcagggaaggggacgacgacgaacgcgacggtgacggcggcggcgag 499
Query: 481 ttttcaaccttcgttgtgcgttcgactgtgaaatccgtcgagagagagtcagtgagtgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttttcaaccttcgttgtgcgttcgactgtgaaatccgtcgagagagagtcagtgagtgga 559
Query: 541 accatggt 548
||||||||
Sbjct: 560 accatggt 567
Score = 448 bits (226), Expect = e-125
Identities = 226/226 (100%)
Strand = Plus / Plus
Query: 579 ttcgacgatggagagggcggtggcgagtatgcaggcggttggggagcctggattcgggaa 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttcgacgatggagagggcggtggcgagtatgcaggcggttggggagcctggattcgggaa 657
Query: 639 gcagaggagggcaagtggatcctcacagaacgaggaagcgaagcatcaatcgttaacagc 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gcagaggagggcaagtggatcctcacagaacgaggaagcgaagcatcaatcgttaacagc 717
Query: 699 caaagtttcgtcgagttcgattcctgagagtgttaccagagaggaccctaccaccaagta 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 caaagtttcgtcgagttcgattcctgagagtgttaccagagaggaccctaccaccaagta 777
Query: 759 cgaattgctcaatgaacttggtaaggggtcctatggagctgtttac 804
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 cgaattgctcaatgaacttggtaaggggtcctatggagctgtttac 823
>gnl|LJGI|TC60750 similar to UniRef100_A7P2E2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (19%)
Length = 746
Score = 906 bits (457), Expect = 0.0
Identities = 469/473 (99%)
Strand = Plus / Plus
Query: 2048 cacaaactggaattggtagtggtatgagcactagcacattgaagaatgaaacagtcagcc 2107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacaaactggaattggtagtggtatgagcactagcacattgaagaatgaaacagtcagcc 60
Query: 2108 gcaaagcatttgctttacaagataagctttggtccatttatgctgctggtaatacagtac 2167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaaagcatttgctttacaagataagctttggtccatttatgctgctggtaatacagtac 120
Query: 2168 ccataccattcttaagggcaacagatatatcacctattgcgctcctttcagacaatgttc 2227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccataccattcttaagggcaacagatatatcacctattgcgctcctttcagacaatgttc 180
Query: 2228 ttggtggcgtgcgacaggataccagtggaactggagcaatagaagcattacaagagcttt 2287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggtggcgtgcgacaggataccagtggaactggagcaatagaagcattacaagagcttt 240
Query: 2288 ttagtggtgatggacagtccaaaaagagtcggagaggaattaatgagatgccacttcctc 2347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttagtggtgatggacagtccaaaaagagtcggagaggaattaatgagatgccacttcctc 300
Query: 2348 caagcatttaccaaagattgacatcgagttctactctaatgaacttggcacaggctttag 2407
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 caagcatttaccaaagattgacatcgagttttactctaatgaacttggcacaggctttag 360
Query: 2408 cttaccataaaatgtgttatgaagatatgccattgcaagagctgcaagcaacccaggaac 2467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttaccataaaatgtgttatgaagatatgccattgcaagagctgcaagcaacccaggaac 420
Query: 2468 agcggactatccaaaatctctcagacacacttcggaccattcttcgattgtag 2520
||||||||||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct: 421 agcggactatccaaaatttttcagacacacttcggaccatttttcgattgtag 473
>gnl|LJGI|AV771507 similar to UniRef100_A7P2E2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (8%)
Length = 480
Score = 262 bits (132), Expect = 1e-68
Identities = 177/192 (92%)
Strand = Plus / Plus
Query: 2329 aatgagatgccacttcctccaagcatttaccaaagattgacatcgagttctactctaatg 2388
|||||||| | ||||||||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 264 aatgagatacaacttcctccaagcatttaccagagatggacattaagttctactctaatg 323
Query: 2389 aacttggcacaggctttagcttaccataaaatgtgttatgaagatatgccattgcaagag 2448
|||| ||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 324 aactgggcacaggctttaccttaccataaaatgtattatgaagatatgccatggcaagag 383
Query: 2449 ctgcaagcaacccaggaacagcggactatccaaaatctctcagacacacttcggaccatt 2508
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 384 tggcaagcaacccaggaacagcggactatccaaaatctctgggacacacttcggaccatt 443
Query: 2509 cttcgattgtag 2520
||| ||||||||
Sbjct: 444 cttggattgtag 455
>gnl|LJGI|AV775101
Length = 402
Score = 111 bits (56), Expect = 2e-23
Identities = 109/123 (88%), Gaps = 4/123 (3%)
Strand = Plus / Minus
Query: 2401 gctttagcttaccataaaatgtgttatgaagatatgccattgcaagagctgcaagcaacc 2460
|||||||||||||||||| ||||||||||||||| |||||| | |||||||| |||||||
Sbjct: 402 gctttagcttaccataaactgtgttatgaagataagccattcccagagctgc-agcaacc 344
Query: 2461 c--aggaacagcggactatccaaaatctctcagacacacttcggaccattct-tcgattg 2517
| ||| | ||||||||||| || |||||||||||||||||||||| |||| |||||||
Sbjct: 343 ccacggacccgcggactatcccaactctctcagacacacttcggacccttctctcgattg 284
Query: 2518 tag 2520
|||
Sbjct: 283 tag 281