Miyakogusa Predicted Gene
- Lj2g3v1241150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1241150.1 tr|G7JZ57|G7JZ57_MEDTR Receptor-like protein
kinase OS=Medicago truncatula GN=MTR_5g045910 PE=4
SV=1,84.97,0,Protein kinase-like (PK-like),Protein kinase-like domain;
RNI-like,NULL; LRR_4,Leucine rich repeat 4,CUFF.36541.1
(3411 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58946 similar to UniRef100_A7QKS1 Cluster: Chromosome... 1027 0.0
gnl|LJGI|TC66447 similar to UniRef100_A7NXS5 Cluster: Chromosome... 718 0.0
gnl|LJGI|FS358739 similar to UniRef100_A7NXS5 Cluster: Chromosom... 688 0.0
gnl|LJGI|TC70660 similar to UniRef100_A7PN67 Cluster: Chromosome... 56 2e-06
>gnl|LJGI|TC58946 similar to UniRef100_A7QKS1 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(13%)
Length = 845
Score = 1027 bits (518), Expect = 0.0
Identities = 518/518 (100%)
Strand = Plus / Plus
Query: 2894 cagttgctggttcctatggatatattgctccagaatatggctacatgttgaagatcacag 2953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagttgctggttcctatggatatattgctccagaatatggctacatgttgaagatcacag 60
Query: 2954 agaagagtgacgtttacagctatggtgtggtgttgctggaagtcttgacaggtaagcaac 3013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaagagtgacgtttacagctatggtgtggtgttgctggaagtcttgacaggtaagcaac 120
Query: 3014 caattgatccaaccataccagatggtctacatgttgttgattgggtgagacagaaaaggg 3073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caattgatccaaccataccagatggtctacatgttgttgattgggtgagacagaaaaggg 180
Query: 3074 gtattgaagtgcttgatccaagcttactctctagaccagaatcagaaatagaggaaatga 3133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtattgaagtgcttgatccaagcttactctctagaccagaatcagaaatagaggaaatga 240
Query: 3134 tgcaggcactgggaatagccttgttgtgtgtgaattcatcccctgatgagaggccaacaa 3193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcaggcactgggaatagccttgttgtgtgtgaattcatcccctgatgagaggccaacaa 300
Query: 3194 tgagagatatagccgcaatgctcaaggagataaagcatgagagggaggaatatgcaaaat 3253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgagagatatagccgcaatgctcaaggagataaagcatgagagggaggaatatgcaaaat 360
Query: 3254 ttgatgtgcttctaaaagggtctcctgcaaatagaagctgtggaggtggtggtggagttc 3313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgatgtgcttctaaaagggtctcctgcaaatagaagctgtggaggtggtggtggagttc 420
Query: 3314 tggcaacatcttcatcagtatcaagaagcaacaacacaagcttctctgtgtcttctctgc 3373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggcaacatcttcatcagtatcaagaagcaacaacacaagcttctctgtgtcttctctgc 480
Query: 3374 ttcattcatcttcaagtgccaacctgagtttcaaatga 3411
||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttcattcatcttcaagtgccaacctgagtttcaaatga 518
>gnl|LJGI|TC66447 similar to UniRef100_A7NXS5 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 719
Score = 718 bits (362), Expect = 0.0
Identities = 362/362 (100%)
Strand = Plus / Plus
Query: 1 atgtttcatggtttcaattcaatgctgagctcgaggcaatccttctacacctcttccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 atgtttcatggtttcaattcaatgctgagctcgaggcaatccttctacacctcttccttg 417
Query: 61 tcctcatcactattatgtatcattcttctccaagctaatcttctctatggccttgccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tcctcatcactattatgtatcattcttctccaagctaatcttctctatggccttgccttc 477
Query: 121 tctgctaaccatgaagcctcaactctcttctcatggctccatagttcttcttcatcatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tctgctaaccatgaagcctcaactctcttctcatggctccatagttcttcttcatcatca 537
Query: 181 ccaccccctccatctttctctaactggaatattcttgataacaatccatgcaactggacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ccaccccctccatctttctctaactggaatattcttgataacaatccatgcaactggacc 597
Query: 241 tgtattacatgctcctcactaggctttgtcactgaaatcaacatacaatccacccctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tgtattacatgctcctcactaggctttgtcactgaaatcaacatacaatccacccctctt 657
Query: 301 gagcttcccgtacttttcaatctctcttcattcccctttcttcacaagcttgtaatttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gagcttcccgtacttttcaatctctcttcattcccctttcttcacaagcttgtaatttct 717
Query: 361 ga 362
||
Sbjct: 718 ga 719
>gnl|LJGI|FS358739 similar to UniRef100_A7NXS5 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 691
Score = 688 bits (347), Expect = 0.0
Identities = 364/370 (98%), Gaps = 6/370 (1%)
Strand = Plus / Minus
Query: 3042 acatgttgttgattgggtgagacagaaaaggggtattgaagtgcttgatccaagcttact 3101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 acatgttgttgattgggtgagacagaaaaggggtattgaagtgcttgatccaagcttact 632
Query: 3102 ctctagaccagaatcagaaatagaggaaatgatgcaggcactgggaatagccttgttgtg 3161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctctagaccagaatcagaaatagaggaaatgatgcaggcactgggaatagccttgttgtg 572
Query: 3162 tgtgaattcatcccctgatgagaggccaacaatgagagatatagccgcaatgctcaagga 3221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tgtgaattcatcccctgatgagaggccaacaatgagagatatagccgcaatgctcaagga 512
Query: 3222 gataaagcatgagagggaggaatatgcaaaatttgatgtgcttctaaaagggtctcctgc 3281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gataaagcatgagagggaggaatatgcaaaatttgatgtgcttctaaaagggtctcctgc 452
Query: 3282 aaatagaagctgtggaggtggtggtggagttctggcaacatcttcatcagtatcaagaag 3341
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 451 aaatagaagctgtggaggtggtggtggagttctggcaacatcttc------atcaagaag 398
Query: 3342 caacaacacaagcttctctgtgtcttctctgcttcattcatcttcaagtgccaacctgag 3401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 caacaacacaagcttctctgtgtcttctctgcttcattcatcttcaagtgccaacctgag 338
Query: 3402 tttcaaatga 3411
||||||||||
Sbjct: 337 tttcaaatga 328
>gnl|LJGI|TC70660 similar to UniRef100_A7PN67 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 773
Score = 56.0 bits (28), Expect = 2e-06
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 2897 ttgctggttcctatggatatattgctccagaatatg 2932
|||||||||| ||||||||||| |||||||||||||
Sbjct: 131 ttgctggttcttatggatatatagctccagaatatg 166