Miyakogusa Predicted Gene
- Lj2g3v1239840.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1239840.1 Non Chatacterized Hit- tr|B9RDA1|B9RDA1_RICCO
Transketolase, putative OS=Ricinus communis
GN=RCOM_16,92.07,0,Transketolase, pyrimidine binding
domain,Transketolase-like, pyrimidine-binding domain; Thiamin
diph,NODE_33443_length_908_cov_1061.459229.path1.1
(683 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77557 homologue to UniRef100_A7QGQ5 Cluster: Chromoso... 1354 0.0
gnl|LJGI|FS353586 similar to UniRef100_A7QGQ5 Cluster: Chromosom... 240 9e-63
gnl|LJGI|TC77606 homologue to UniRef100_A7QGQ5 Cluster: Chromoso... 151 7e-36
>gnl|LJGI|TC77557 homologue to UniRef100_A7QGQ5 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (78%)
Length = 1804
Score = 1354 bits (683), Expect = 0.0
Identities = 683/683 (100%)
Strand = Plus / Plus
Query: 1 atgaccttgctgaaaatgtttgggaacttccaaaaggacactccggcggagcgtaatgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 atgaccttgctgaaaatgtttgggaacttccaaaaggacactccggcggagcgtaatgtc 685
Query: 61 agatttggtgttagagaacatggaatgggagctatctgcaatggtattgctcttcacagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 agatttggtgttagagaacatggaatgggagctatctgcaatggtattgctcttcacagc 745
Query: 121 cctggactgattccttactgtgcaactttctttgttttcaccgactacatgagaggtgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 cctggactgattccttactgtgcaactttctttgttttcaccgactacatgagaggtgcc 805
Query: 181 ataaggctttctgccctgtctgaggctggggttatatatgtcatgacccatgattccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ataaggctttctgccctgtctgaggctggggttatatatgtcatgacccatgattccata 865
Query: 241 gggctcggagaggatgggccaacccaccagccgatagagcatcttgcgagcttccgggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 gggctcggagaggatgggccaacccaccagccgatagagcatcttgcgagcttccgggca 925
Query: 301 atgccgaacatcctgatgcttcgtcctgcagatggtaatgaaacagctggagcttacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 atgccgaacatcctgatgcttcgtcctgcagatggtaatgaaacagctggagcttacaaa 985
Query: 361 gttgctgtggttaacaggaagagaccctctatccttgccctttccaggcaaaaattgccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 gttgctgtggttaacaggaagagaccctctatccttgccctttccaggcaaaaattgccc 1045
Query: 421 aatcttcctggaacttcaattgaaggagttgaaaagggtgggtacaccatttccgacaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 aatcttcctggaacttcaattgaaggagttgaaaagggtgggtacaccatttccgacaac 1105
Query: 481 tcaaccggcaacaagcccgatgtcattctgatcggaactggttctgagttggaaattgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 tcaaccggcaacaagcccgatgtcattctgatcggaactggttctgagttggaaattgct 1165
Query: 541 gccaaagctgctgatgatctaagaaaggaagggaaggcagttagagttgtttccttcgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 gccaaagctgctgatgatctaagaaaggaagggaaggcagttagagttgtttccttcgtc 1225
Query: 601 tcatgggaacttttcgatgagcaatcagaagcttacaaggagagtgttctaccttccgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 tcatgggaacttttcgatgagcaatcagaagcttacaaggagagtgttctaccttccgct 1285
Query: 661 gtttcagctagagttagcattga 683
|||||||||||||||||||||||
Sbjct: 1286 gtttcagctagagttagcattga 1308
>gnl|LJGI|FS353586 similar to UniRef100_A7QGQ5 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 750
Score = 240 bits (121), Expect = 9e-63
Identities = 295/353 (83%)
Strand = Plus / Minus
Query: 331 gatggtaatgaaacagctggagcttacaaagttgctgtggttaacaggaagagaccctct 390
|||||||||||||| || ||| | ||||||||||| ||| |||||| ||||||||||||
Sbjct: 748 gatggtaatgaaactgccggatcatacaaagttgccgtgcttaacaagaagagaccctca 689
Query: 391 atccttgccctttccaggcaaaaattgcccaatcttcctggaacttcaattgaaggagtt 450
|||||||||||||| ||||||| || ||| | ||||| |||||||| ||||||||||||
Sbjct: 688 atccttgccctttctcggcaaaagttaccccagcttccgggaacttctattgaaggagtt 629
Query: 451 gaaaagggtgggtacaccatttccgacaactcaaccggcaacaagcccgatgtcattctg 510
||||||||||| |||| |||||| ||||||||| | || |||||||| ||||| || ||
Sbjct: 628 gaaaagggtggctacatcatttcagacaactcatcaggtaacaagcctgatgtgatcttg 569
Query: 511 atcggaactggttctgagttggaaattgctgccaaagctgctgatgatctaagaaaggaa 570
| | ||||||||||||||||||||||| ||| |||| ||| |||||||| ||||||
Sbjct: 568 ctgagcactggttctgagttggaaattgccgccgctgctggtgaggatctaaggaaggaa 509
Query: 571 gggaaggcagttagagttgtttccttcgtctcatgggaacttttcgatgagcaatcagaa 630
|| || | |||||||||||||| || || ||||||||||| ||||| || |||||
Sbjct: 508 ggaaaaactgttagagttgtttcttttgttagctgggaactttttgatgaccagtcagat 449
Query: 631 gcttacaaggagagtgttctaccttccgctgtttcagctagagttagcattga 683
| ||||||||||||||||| ||| | ||||| |||||||||||||||||||
Sbjct: 448 gaatacaaggagagtgttctccctgctgctgtgacagctagagttagcattga 396
>gnl|LJGI|TC77606 homologue to UniRef100_A7QGQ5 Cluster: Chromosome chr16
scaffold_94, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_94, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (38%)
Length = 718
Score = 151 bits (76), Expect = 7e-36
Identities = 127/144 (88%)
Strand = Plus / Plus
Query: 28 ttccaaaaggacactccggcggagcgtaatgtcagatttggtgttagagaacatggaatg 87
||||||||||| || || | ||||| ||||| |||||||||||||||| || ||||||
Sbjct: 575 ttccaaaaggataccccagaagagcgcaatgttcgatttggtgttagagagcacggaatg 634
Query: 88 ggagctatctgcaatggtattgctcttcacagccctggactgattccttactgtgcaact 147
||||| ||||||||||||||||||||||||||||||||| | ||||| || |||||||||
Sbjct: 635 ggagcaatctgcaatggtattgctcttcacagccctggattcattccatattgtgcaact 694
Query: 148 ttctttgttttcaccgactacatg 171
|||||||| ||||| |||||||||
Sbjct: 695 ttctttgtcttcactgactacatg 718