Miyakogusa Predicted Gene
- Lj2g3v1226720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1226720.1 tr|B9HWV3|B9HWV3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_659034 PE=4
SV=1,34.27,0.00000000000005,seg,NULL; DnaJ,Heat shock protein DnaJ,
N-terminal; coiled-coil,NULL; Chaperone J-domain,Heat shock
,CUFF.36528.1
(2031 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67419 similar to UniRef100_A7P2B8 Cluster: Chromosome... 1332 0.0
gnl|LJGI|TC80676 similar to UniRef100_A7P2B8 Cluster: Chromosome... 1257 0.0
gnl|LJGI|AW720308 924 0.0
gnl|LJGI|TC75740 630 e-180
>gnl|LJGI|TC67419 similar to UniRef100_A7P2B8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (86%)
Length = 1102
Score = 1332 bits (672), Expect = 0.0
Identities = 678/680 (99%)
Strand = Plus / Plus
Query: 1352 tcagcccaaatgcttgtgaaatgcaagtcgacaacaatgaatctgcattggaaagtaaag 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcagcccaaatgcttgtgaaatgcaagtcgacaacaatgaatctgcattggaaagtaaag 61
Query: 1412 aggccagtttagctgaagtgtattctatctgtgcctctattgatgaaagacatgttaatg 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aggccagtttagctgaagtgtattctatctgtgcctctattgatgaaagacatgttaatg 121
Query: 1472 gtaatgggcttgtgttacatggtcaagatggtggtcttactgcttcaaatgagagaaata 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtaatgggcttgtgttacatggtcaagatggtggtcttactgcttcaaatgagagaaata 181
Query: 1532 taattaatgaaaaagaaaagctcaaggagactgatgaatataaacaagccgtagaagagg 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 taattaatgaaaaagaaaagctcaaggagactgatgaatataaacaagccgtagaagagg 241
Query: 1592 aatgggcatccagacaacgacaactgcaaattcaggcagaggaggcacaaagattacgca 1651
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 242 aatgggcatccagacaacgacaactgcaaattcaggcagagggggcacaaagattacgca 301
Query: 1652 aaaggaaaaaggcagaaagtcaacgcatactggacatgcagagaaggcaaaaagaacgca 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaaggaaaaaggcagaaagtcaacgcatactggacatgcagagaaggcaaaaagaacgca 361
Query: 1712 ttgaagaagtgagagagacacaaaagaaggatgaagagtttttgaacatgaaagagcaac 1771
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttgaagaagcgagagagacacaaaagaaggatgaagagtttttgaacatgaaagagcaac 421
Query: 1772 tgcgggttgaaatacggaagaggcttaatcaattggagatgcgttgttctgatatgacct 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgcgggttgaaatacggaagaggcttaatcaattggagatgcgttgttctgatatgacct 481
Query: 1832 cactcctccgtggcttaggaatacatgttggaggaagctttcccaaggagctgcatgcag 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cactcctccgtggcttaggaatacatgttggaggaagctttcccaaggagctgcatgcag 541
Query: 1892 cctataagcgggccttgtttaagtttcatcctgaccgtgcatcaaaaacggacattcgtg 1951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cctataagcgggccttgtttaagtttcatcctgaccgtgcatcaaaaacggacattcgtg 601
Query: 1952 agcaggttgaggctgaggagaaattcaagctcatctctcgcttgaaggacaagtatttgt 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 agcaggttgaggctgaggagaaattcaagctcatctctcgcttgaaggacaagtatttgt 661
Query: 2012 tgactccatgtcgctaaatt 2031
||||||||||||||||||||
Sbjct: 662 tgactccatgtcgctaaatt 681
Score = 91.7 bits (46), Expect = 2e-17
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 1214 tcagcccaaatgcatgtgaaatgcaagttgacaacaatgaatctgcattggggagtaaag 1273
||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 2 tcagcccaaatgcttgtgaaatgcaagtcgacaacaatgaatctgcattggaaagtaaag 61
Query: 1274 atgccggttt 1283
| ||| ||||
Sbjct: 62 aggccagttt 71
>gnl|LJGI|TC80676 similar to UniRef100_A7P2B8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (40%)
Length = 717
Score = 1257 bits (634), Expect = 0.0
Identities = 692/701 (98%), Gaps = 9/701 (1%)
Strand = Plus / Plus
Query: 1096 agagaagaaaaagtgtctcccagccccaagggtaaaaacagtgattactttagtggtgct 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 agagaagaaaaagtgtctcccagccccaagggtaaaaacagtgattactttagtggtgct 78
Query: 1156 tctggtgcttcaagtttcaagaaagatttgagtgttgaagagtctaaatctatgggcttc 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tctggtgcttcaagtttcaagaaagatttgagtgttgaagagtctaaatctatgggcttc 138
Query: 1216 agcccaaatgcatgtgaaatgcaagttgacaacaatgaatctgcattggggagtaaagat 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 agcccaaatgcatgtgaaatgcaagttgacaacaatgaatctgcattggggagtaaagat 198
Query: 1276 gccggtttccagaaagatatgggtgatttaagtttcaagaaagatttgggtgttgaagag 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gccggtttccagaaagatatgggtgatttaagtttcaagaaagatttgggtgttgaagag 258
Query: 1336 tctaaatctatgggcttcagcccaaatgcttgtgaaatgcaagtc-gacaacaatgaatc 1394
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 259 tctaaatctatgggcttcagcccaaatgcttgtgaaatgcaagtccgacaacaatgaatc 318
Query: 1395 tgcattggaaagt-aaagaggccagtttagct-gaagtgt-attc-tatct-gtgcctc- 1448
||||||||||||| |||||||||||||||||| ||||||| |||| ||||| |||||||
Sbjct: 319 tgcattggaaagttaaagaggccagtttagcttgaagtgttattcctatcttgtgcctcc 378
Query: 1449 tattgatgaaagacatgttaatggtaatgggcttgtgttacatggtcaagatggtggtct 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tattgatgaaagacatgttaatggtaatgggcttgtgttacatggtcaagatggtggtct 438
Query: 1509 tactgcttcaaatgagagaaatataattaatgaaaaagaaaagctcaaggagactgatga 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tactgcttcaaatgagagaaatataattaatgaaaaagaaaagctcaaggagactgatga 498
Query: 1569 atataaacaagccgtagaagaggaatgggcatccagacaacgacaactgcaaattcaggc 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atataaacaagccgtagaagaggaatgggcatccagacaacgacaactgcaaattcaggc 558
Query: 1629 agaggaggcacaaagattacgcaaaaggaaaaaggcagaaagtcaacgcatactggacat 1688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agaggaggcacaaagattacgcaaaaggaaaaaggcagaaagtcaacgcatactggacat 618
Query: 1689 gcagagaaggcaaaaagaacgcattgaagaagtgagagagacacaaaagaaggatgaaga 1748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gcagagaaggcaaaaagaacgcattgaagaagtgagagagacacaaaagaaggatgaaga 678
Query: 1749 gtttttgaacatgaaagagcaactgcgggttgaaatacgga 1789
| ||||||||||||||||||||||||||||||||||||||
Sbjct: 679 g--tttgaacatgaaagagcaactgcgggttgaaatacgga 717
>gnl|LJGI|AW720308
Length = 492
Score = 924 bits (466), Expect = 0.0
Identities = 483/491 (98%)
Strand = Plus / Plus
Query: 620 gcggggtatccaataatcaaacttgtcaggaagagcatgccgggccttccagatgtcaca 679
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcggggtatccaataatcaaacgtgtcaggaagagcatgccgggccttccagatgtcaca 61
Query: 680 ataatgtttacattgatattgatgaggaaaatacttatgaacagcatgctgaagtccctg 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ataatgtttacattgatattgatgaggaaaatacttatgaacagcatgctgaagtccctg 121
Query: 740 tatatcctggtcccagcaatggtaaatatgtcaaggagagtcaaccttccttctctgcta 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tatatcctggtcccagcaatggtaaatatgtcaaggagagtcaaccttccttctctgcta 181
Query: 800 gagacgatagtcaagtgcctcgctgccccaaggnnnnnnnttgtaatttctgtaacagtg 859
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 182 gagacgatagtcaagtgcctcgctgccccaaggaaaaaaattgtaatttctgtaacagtg 241
Query: 860 ttgctggtccttcaaagttcaaggagaatcaaccttccttctcttataaggatggtagtc 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttgctggtccttcaaagttcaaggagaatcaaccttccttctcttataaggatggtagtc 301
Query: 920 aagtgaatgggatttattttaatgttgaaactaaaacttctttcaaggactctgatcaga 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aagtgaatgggatttattttaatgttgaaactaaaacttctttcaaggactctgatcaga 361
Query: 980 aagctgagcagagttctaaatctcctaggtctgaatccgtaaaggaaatgcattcttttc 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aagctgagcagagttctaaatctcctaggtctgaatccgtaaaggaaatgcattcttttc 421
Query: 1040 gtcaaagttttgatgtcaagaatcaatgttctgatatcaaaaatggagaaaggacaagag 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtcaaagttttgatgtcaagaatcaatgttctgatatcaaaaatggagaaaggacaagag 481
Query: 1100 aagaaaaagtg 1110
|||||||||||
Sbjct: 482 aagaaaaagtg 492
>gnl|LJGI|TC75740
Length = 739
Score = 630 bits (318), Expect = e-180
Identities = 318/318 (100%)
Strand = Plus / Minus
Query: 281 gtggaagtgatggtgcggaccgtcgtggaaatggtgatgctgaaggaggtggggagttgg 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtggaagtgatggtgcggaccgtcgtggaaatggtgatgctgaaggaggtggggagttgg 259
Query: 341 atagtgatgccacttcaagcaaaaggcattcgtcttcctcgagctctgagcaaaattcgt 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atagtgatgccacttcaagcaaaaggcattcgtcttcctcgagctctgagcaaaattcgt 199
Query: 401 tacacaacgatgttgatgatagtcggaatgcctataaaaaagagtctgtatctaacatgg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tacacaacgatgttgatgatagtcggaatgcctataaaaaagagtctgtatctaacatgg 139
Query: 461 atagaaggaagaaatcgttcttcggtgaggatgctggtggaagtcgttatggtttatatg 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atagaaggaagaaatcgttcttcggtgaggatgctggtggaagtcgttatggtttatatg 79
Query: 521 ggtctgaatctgagtcatctgatagtgattgttctgattgcgagttcatggaccgtgacg 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ggtctgaatctgagtcatctgatagtgattgttctgattgcgagttcatggaccgtgacg 19
Query: 581 agtgggaaaagtgggaaa 598
||||||||||||||||||
Sbjct: 18 agtgggaaaagtgggaaa 1
Score = 476 bits (240), Expect = e-133
Identities = 250/252 (99%), Gaps = 1/252 (0%)
Strand = Plus / Minus
Query: 1 atgatggagaagggtgtctccagagagcattttcgacccaggacatgttctgggaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 atgatggagaagggtgtctccagagagcattttcgacccaggacatgttctgggaagaag 540
Query: 61 agcgcacccgaaactagccaggtgaaaaaagagggtttgaagaatgttatttacattgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 agcgcacccgaaactagccaggtgaaaaaagagggtttgaagaatgttatttacattgat 480
Query: 121 gtggacaatgatcaggttgatgatgtggtgatattagaatctcctgagttcgtgtcacga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gtggacaatgatcaggttgatgatgtggtgatattagaatctcctgagttcgtgtcacga 420
Query: 181 aaggtgcgtggttcgtgtgggccgagtagagaaagga-cttttacgccccagagtgttat 239
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 419 aaggtgcgtggttcgtgtgggccgagtagagaaaggagcttttacgccccagagtgttat 360
Query: 240 cagcattgatac 251
|||||| |||||
Sbjct: 359 cagcatcgatac 348