Miyakogusa Predicted Gene
- Lj2g3v1225640.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1225640.2 Non Chatacterized Hit- tr|I3T3C1|I3T3C1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.86,0,seg,NULL;
AAA,ATPase, AAA-type, core; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; P-loop contai,CUFF.36520.2
(1257 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65071 similar to UniRef100_A7PVG5 Cluster: Chromosome... 2256 0.0
gnl|LJGI|TC73782 similar to UniRef100_Q45YI8 Cluster: Rubisco ac... 672 0.0
>gnl|LJGI|TC65071 similar to UniRef100_A7PVG5 Cluster: Chromosome chr9 scaffold_33,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_33, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 1547
Score = 2256 bits (1138), Expect = 0.0
Identities = 1141/1142 (99%)
Strand = Plus / Plus
Query: 116 gcagcagtgataataataacaagaagcggttgtcacagcaatcatcttgggaagcgaaag 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gcagcagtgataataataacaagaagcggttgtcacagcaatcatcttgggaagcgaaag 254
Query: 176 atgcagagggaagagactatctctacaggcttggtaaagaggctgataacatgaacatcg 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atgcagagggaagagactatctctacaggcttggtaaagaggctgataacatgaacatcg 314
Query: 236 ccgtcggccagcgtgccggcgtcatcgatgatctcttcgccggcaattttctcggcaaag 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ccgtcggccagcgtgccggcgtcatcgatgatctcttcgccggcaattttctcggcaaag 374
Query: 296 attccgatatcgtgtttgattatcgtcagaaagccaccagatcctttcaataccttcagg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 attccgatatcgtgtttgattatcgtcagaaagccaccagatcctttcaataccttcagg 434
Query: 356 gcgattattacatcgctcctctcttcatggacaaagttgtatgtcacattgcaaagaact 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gcgattattacatcgctcctctcttcatggacaaagttgtatgtcacattgcaaagaact 494
Query: 416 acctagctcatctcctcaatgttaaggttcctttaattctaggtatttggggaggaaaag 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acctagctcatctcctcaatgttaaggttcctttaattctaggtatttggggaggaaaag 554
Query: 476 ggcaagggaaaacatttcaaacagaacttatatttcaggccatgggtatggaacctgtaa 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ggcaagggaaaacatttcaaacagaacttatatttcaggccatgggtatggaacctgtaa 614
Query: 536 ttatgtctgctggggaactagaatccgagagagctggagagccaggacggttgattcgtg 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttatgtctgctggggaactagaatccgagagagctggagagccaggacggttgattcgtg 674
Query: 596 aacgctatagaacagcatctcaagtggtccagaatcaaggaaaaatgagctgtttgatga 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aacgctatagaacagcatctcaagtggtccagaatcaaggaaaaatgagctgtttgatga 734
Query: 656 tcaatgacattgatgctggccttggtagatttgggaatactcaaatgacagtcaacaatc 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tcaatgacattgatgctggccttggtagatttgggaatactcaaatgacagtcaacaatc 794
Query: 716 aaattgttgttgggactcttatgaatctgtctgacaatcctacaagagtaagcgttggcc 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 aaattgttgttgggactcttatgaatctgtctgacaatcctacaagagtaagcgttggcc 854
Query: 776 aagattggcgagaatcagatatcacaaacagaattccaatcattgtaacagggaatgatt 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 aagattggcgagaatcagatatcacaaacagaattccaatcattgtaacagggaatgatt 914
Query: 836 tttcaactatttatgctccactgatacgtgatggaaggatggataaattttactggcaac 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 tttcaactatttatgctccactgatacgtgatggaaggatggataaattttactggcaac 974
Query: 896 ctaaccgtgaagatatccagaatattgttcacagaatgtatgagaaagatggtatatcaa 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 ctaaccgtgaagatatccagaatattgttcacagaatgtatgagaaagatggtatatcaa 1034
Query: 956 gggatgaagttgaaaggattgtggatactttccctaatcaagcattggacttttatggag 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 gggatgaagttgaaaggattgtggatactttccctaatcaagcattggacttttatggag 1094
Query: 1016 ctctaagatcacgtacctatgacaagtctattttaaagtgggttgatgacattggaggtg 1075
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 ccctaagatcacgtacctatgacaagtctattttaaagtgggttgatgacattggaggtg 1154
Query: 1076 ttgaaaattttggaagcaaaattctcaaaagaagaaaggaccagaaccttcctgtgttta 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 ttgaaaattttggaagcaaaattctcaaaagaagaaaggaccagaaccttcctgtgttta 1214
Query: 1136 ttcctccagagcaaacagtggatgccttgctggagtcaggttattctctgatcaaagaac 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 ttcctccagagcaaacagtggatgccttgctggagtcaggttattctctgatcaaagaac 1274
Query: 1196 aagagttggtcatggaatctaaactttcaaaggaatacatgaagaacatggaagactgac 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1275 aagagttggtcatggaatctaaactttcaaaggaatacatgaagaacatggaagactgac 1334
Query: 1256 at 1257
||
Sbjct: 1335 at 1336
Score = 163 bits (82), Expect = 3e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 atgcatcagagtcacatggcgaaggtgttaccgttatggattccggttccgaactctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atgcatcagagtcacatggcgaaggtgttaccgttatggattccggttccgaactctaaa 127
Query: 61 cacgcattcagatcgcaattga 82
||||||||||||||||||||||
Sbjct: 128 cacgcattcagatcgcaattga 149
>gnl|LJGI|TC73782 similar to UniRef100_Q45YI8 Cluster: Rubisco activase 2; n=1;
Mesembryanthemum crystallinum|Rep: Rubisco activase 2 -
Mesembryanthemum crystallinum (Common ice plant),
partial (23%)
Length = 516
Score = 672 bits (339), Expect = 0.0
Identities = 339/339 (100%)
Strand = Plus / Plus
Query: 116 gcagcagtgataataataacaagaagcggttgtcacagcaatcatcttgggaagcgaaag 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gcagcagtgataataataacaagaagcggttgtcacagcaatcatcttgggaagcgaaag 237
Query: 176 atgcagagggaagagactatctctacaggcttggtaaagaggctgataacatgaacatcg 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atgcagagggaagagactatctctacaggcttggtaaagaggctgataacatgaacatcg 297
Query: 236 ccgtcggccagcgtgccggcgtcatcgatgatctcttcgccggcaattttctcggcaaag 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ccgtcggccagcgtgccggcgtcatcgatgatctcttcgccggcaattttctcggcaaag 357
Query: 296 attccgatatcgtgtttgattatcgtcagaaagccaccagatcctttcaataccttcagg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 attccgatatcgtgtttgattatcgtcagaaagccaccagatcctttcaataccttcagg 417
Query: 356 gcgattattacatcgctcctctcttcatggacaaagttgtatgtcacattgcaaagaact 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gcgattattacatcgctcctctcttcatggacaaagttgtatgtcacattgcaaagaact 477
Query: 416 acctagctcatctcctcaatgttaaggttcctttaattc 454
|||||||||||||||||||||||||||||||||||||||
Sbjct: 478 acctagctcatctcctcaatgttaaggttcctttaattc 516
Score = 163 bits (82), Expect = 3e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 atgcatcagagtcacatggcgaaggtgttaccgttatggattccggttccgaactctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atgcatcagagtcacatggcgaaggtgttaccgttatggattccggttccgaactctaaa 128
Query: 61 cacgcattcagatcgcaattga 82
||||||||||||||||||||||
Sbjct: 129 cacgcattcagatcgcaattga 150