Miyakogusa Predicted Gene
- Lj2g3v1196520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1196520.1 Non Chatacterized Hit- tr|C0HIK1|C0HIK1_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,67.14,2e-18,seg,NULL;
DUF2232,Protein of unknown function DUF2232, membrane,CUFF.36446.1
(927 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023966 similar to UniRef100_A7P2X7 Cluster: Chromosom... 874 0.0
>gnl|LJGI|GO023966 similar to UniRef100_A7P2X7 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 795
Score = 874 bits (441), Expect = 0.0
Identities = 482/489 (98%), Gaps = 5/489 (1%)
Strand = Plus / Plus
Query: 128 ctgcacccagttttcctttcagaatcaaacccccattatctctctcccctctttcttttc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ctgcacccagttttcctttcagaatcaaacccccattatctctctcccctctttcttttc 366
Query: 188 caacatcctccaatcttctcagggtttcaaatattggagtgccagttttcagtagtgaag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 caacatcctccaatcttctcagggtttcaaatattggagtgccagttttcagtagtgaag 426
Query: 248 aacatcatggagaagaagaagacaacaatgaagtttcgccagacttatcgccaaacggcc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aacatcatggagaagaagaagacaacaatgaagtttcgccagacttatcgccaaacggcc 486
Query: 308 cagtgttccagaaaacactgcaactggttgagtgctccatgtttgctgcactcactggtt 367
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cagtgctccagaaaacactgcaactggttgagtgctccatgtttgctgcactcactggtt 546
Query: 368 tggtctacttcttgagcaattcacttgccattgagaattactttagttgtttcttctcct 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tggtctacttcttgagcaattcacttgccattgagaattactttagttgtttcttctcct 606
Query: 428 tgccgatagtgatatcctcaatgagatggggtgttgatgctggaaggaaaactctggtgt 487
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 607 tgccgatagtgatatcctcaatgagatggggtgttgatgctggaaagaaaactctggtgt 666
Query: 488 caacaactatacttttgtttgtcttgtccggtccagtaaaagctctgacctatctgctta 547
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 667 caacaactatacttttgtttgtcttgtccggtccagt-aaagctctgacctatctgctta 725
Query: 548 agcatggtatagtcggttacacgatgggtacgttgtggaggttggaaacgagttggaacc 607
||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 726 agcat-gtatagtcgg-tacacgatgggtacgttgtggaggttgg-aacgagttgg-acc 781
Query: 608 tgtcaattt 616
|||||||||
Sbjct: 782 tgtcaattt 790
Score = 69.9 bits (35), Expect = 3e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 atgttctccatgaatcctctgaaaacttatcaaca 35
|||||||||||||||||||||||||||||||||||
Sbjct: 180 atgttctccatgaatcctctgaaaacttatcaaca 214