Miyakogusa Predicted Gene

Lj2g3v1196320.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1196320.2 Non Chatacterized Hit- tr|D7T9F0|D7T9F0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,74.57,0,no
description,Armadillo-like helical; ARM repeat,Armadillo-type fold;
seg,NULL; IMPORTIN 9 (IMP9) (,CUFF.36443.2
         (1104 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74477 similar to UniRef100_A7P2Y4 Cluster: Chromosome...   149   4e-35
gnl|LJGI|BP069534 similar to UniRef100_A7P2Y4 Cluster: Chromosom...   141   1e-32

>gnl|LJGI|TC74477 similar to UniRef100_A7P2Y4 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (37%)
          Length = 955

 Score =  149 bits (75), Expect = 4e-35
 Identities = 90/95 (94%)
 Strand = Plus / Plus

                                                                        
Query: 955  tggactaagcaacaaggtgagatacagggggcctatcaaataaaagttactacaagcgcc 1014
            ||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 1    tggactaagcagcaaggtgagatacaggggggctatcaaataaaagttacaacaagcgcc 60

                                               
Query: 1015 ctggccttgttgctaaccagcaggcacaatgaact 1049
            |||||||||||||||||||| | ||||||||||||
Sbjct: 61   ctggccttgttgctaaccagtatgcacaatgaact 95


>gnl|LJGI|BP069534 similar to UniRef100_A7P2Y4 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (14%)
          Length = 408

 Score =  141 bits (71), Expect = 1e-32
 Identities = 77/79 (97%)
 Strand = Plus / Minus

                                                                        
Query: 971  gtgagatacagggggcctatcaaataaaagttactacaagcgccctggccttgttgctaa 1030
            ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 275  gtgagataccgggggcctatcaaataaaagttactaccagcgccctggccttgttgctaa 216

                               
Query: 1031 ccagcaggcacaatgaact 1049
            |||||||||||||||||||
Sbjct: 215  ccagcaggcacaatgaact 197