Miyakogusa Predicted Gene

Lj2g3v1193030.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1193030.1 Non Chatacterized Hit- tr|Q9C661|Q9C661_ARATH
Putative uncharacterized protein F28B23.16 OS=Arabidop,55.77,2e-19,no
description,HD domain; seg,NULL; HD-domain/PDEase-like,NULL; SUBFAMILY
NOT NAMED,NULL; UNCHARACTE,CUFF.36426.1
         (432 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64794 similar to UniRef100_A7P2Y6 Cluster: Chromosome...   488   e-137

>gnl|LJGI|TC64794 similar to UniRef100_A7P2Y6 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (66%)
          Length = 1109

 Score =  488 bits (246), Expect = e-137
 Identities = 246/246 (100%)
 Strand = Plus / Plus

                                                                       
Query: 104 tccgcgcccattcctccgccgaacaacactctcactcctcttcctctgtcatcgattttc 163
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tccgcgcccattcctccgccgaacaacactctcactcctcttcctctgtcatcgattttc 236

                                                                       
Query: 164 tcactctctgcaaccgactcaagaccacgaagaggaaaggatgggtcaatcatgggataa 223
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tcactctctgcaaccgactcaagaccacgaagaggaaaggatgggtcaatcatgggataa 296

                                                                       
Query: 224 aaggtgctgaatcgattgctgaccatatgtaccgcatggctataatggcactgattgctg 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aaggtgctgaatcgattgctgaccatatgtaccgcatggctataatggcactgattgctg 356

                                                                       
Query: 284 ccgatgttcctggattgagtagagaaagatgtatcaaaatagcacttgtgcatgacattg 343
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ccgatgttcctggattgagtagagaaagatgtatcaaaatagcacttgtgcatgacattg 416

                 
Query: 344 cagaag 349
           ||||||
Sbjct: 417 cagaag 422



 Score = 63.9 bits (32), Expect = 8e-10
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 1  atggcagcgattcattcacatattgctcgctt 32
          ||||||||||||||||||||||||||||||||
Sbjct: 59 atggcagcgattcattcacatattgctcgctt 90