Miyakogusa Predicted Gene
- Lj2g3v1192980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1192980.1 Non Chatacterized Hit- tr|I1JEQ6|I1JEQ6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38335
PE,87.45,0,CATATPASE,ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; Calcium ATPase, transmembrane
domain,CUFF.36411.1
(3588 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81733 weakly similar to UniRef100_A7P2Z2 Cluster: Chr... 422 e-117
gnl|LJGI|FS360787 similar to UniRef100_Q0DLI5 Cluster: Os05g0100... 244 3e-63
gnl|LJGI|TC79902 similar to UniRef100_A7P2Z2 Cluster: Chromosome... 236 8e-61
gnl|LJGI|FS351667 similar to UniRef100_A7P6M9 Cluster: Chromosom... 72 3e-11
gnl|LJGI|TC82730 similar to UniRef100_A7PGK8 Cluster: Chromosome... 56 2e-06
gnl|LJGI|BW595505 similar to UniRef100_A7QX90 Cluster: Chromosom... 54 6e-06
>gnl|LJGI|TC81733 weakly similar to UniRef100_A7P2Z2 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 709
Score = 422 bits (213), Expect = e-117
Identities = 403/465 (86%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 2947 tttcctttgttatatcaag-aaggtgtgcaaaatgtcctctttagctggcgtcgaatact 3005
|||||| | |||||||||| |||| || |||||| |||||||||||||||||||||||||
Sbjct: 29 tttcctattttatatcaaggaaggggtacaaaatatcctctttagctggcgtcgaatact 88
Query: 3006 tggctggatgctcaatggattcatcagtgccataataattttcttcttctgcacaaaggc 3065
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 89 cagctggatgctcaatggattcatcagtgccataataatattcttcttctgcacaaaagc 148
Query: 3066 aatggagattcaggcctttgacgaggaggggagaaccgctgggagggacatattgggagc 3125
||||| |||||||||||||||||||||||| |||||||| || | |||||| |||| ||
Sbjct: 149 aatggggattcaggcctttgacgaggagggaagaaccgccggaaaggacatgttggcggc 208
Query: 3126 gacgatgtacacatgcgtggtttgggttgtgaacttgcagatggcactttacatcagtta 3185
|| |||||||| ||||||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 209 aaccatgtacacttgcgtggtttgggttgtgaacttgcagatggcactcgccatacggta 268
Query: 3186 cttcaccttgattcaacatattttcatctggggatccattgcgatctggtatctcttcct 3245
||||||||||||||||||| ||| |||||||||||||||||| ||||| ||||||||||
Sbjct: 269 cttcaccttgattcaacatgtttgcatctggggatccattgctttctggcatctcttcct 328
Query: 3246 cctcgcgtacggatcattgcctccgagcctctccacaaatgcttacaaagtcttcactga 3305
| | || || ||| ||||||| |||||| | || |||||||||||||||||||||| |||
Sbjct: 329 cttggcatatggagcattgccaccgagcatttctacaaatgcttacaaagtcttcattga 388
Query: 3306 aacccttgctccatctccttccttctggattgtgacattgtttgtggtggtctcaactct 3365
||| || ||||||||||| ||||| |||| || || || ||||||| | ||||||| ||
Sbjct: 389 aactctggctccatctccatcctttgggatggtcacgttctttgtggcgatctcaacgct 448
Query: 3366 cataccgtacttctcttactcagcactgcagatgcggttctttcc 3410
|||||||||||||| | |||| | | |||||| ||||||||||
Sbjct: 449 tataccgtacttctcatgctcaacgattcagatgtggttctttcc 493
>gnl|LJGI|FS360787 similar to UniRef100_Q0DLI5 Cluster: Os05g0100600 protein; n=1; Oryza
sativa Japonica Group|Rep: Os05g0100600 protein - Oryza
sativa subsp. japonica (Rice), partial (31%)
Length = 754
Score = 244 bits (123), Expect = 3e-63
Identities = 247/290 (85%), Gaps = 3/290 (1%)
Strand = Plus / Minus
Query: 1442 ccatcaaaggttttaactttgcagatgaaaggatcatgaatggaaactgggttagtgagc 1501
||||||||||||||||||| |||||||||||| ||||| ||||||||||||| |||||
Sbjct: 472 ccatcaaaggttttaacttcatagatgaaaggataatgaagggaaactgggttaatgagc 413
Query: 1502 cttatgcagatgttatccagaannnnnnncgcttattggcaatctgtcatacagccatac 1561
|| || |||||||||| | || |||||||||||| |||| ||||| |||||||
Sbjct: 412 ctaatacagatgttatacgaaagtttttccgcttattggcagtctgccatactgccatac 353
Query: 1562 cagatgtggatgaagaagacacgggaaatgtcacatatgaggctgaatctccagatgaag 1621
|||| ||||||||||| ||| ||||||||| ||||||| || ||||| ||||| ||||
Sbjct: 352 cagaagtggatgaaga---cacaggaaatgtctcatatgaagcagaatcaccagacgaag 296
Query: 1622 cagcatttgtgattgcagcaagagaaattggttttgaattctataaaagaactcaaacta 1681
|||||||||| ||||| |||||||||||||||||| ||||||| || || ||||||||||
Sbjct: 295 cagcatttgttattgctgcaagagaaattggttttaaattctacaataggactcaaacta 236
Query: 1682 gtttatcaatgtacgaattggatccagtttctggtgaaaaagttgaaagg 1731
|||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 235 gtttgtctatgtatgaattcgatccagtttctggtgatgaagttgaaagg 186
Score = 186 bits (94), Expect = 7e-46
Identities = 124/134 (92%)
Strand = Plus / Minus
Query: 1231 tcaaacttaaacgaggaacttggccaagttgacacaatactttctgataaaactggaact 1290
|||||||| || ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 719 tcaaacttgaatgaggaacttggccaagttgacactatactttctgacaaaactggaact 660
Query: 1291 ctgacatgcaactcaatggagttcatcaaatgttccattgctggagtagcttatggccgc 1350
||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 659 ctgacctgcaactcaatggagttcatcaaatgttctattgctggggtagcttatggccgt 600
Query: 1351 ggtgttacggaggt 1364
|||| ||| |||||
Sbjct: 599 ggtgctacagaggt 586
>gnl|LJGI|TC79902 similar to UniRef100_A7P2Z2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (29%)
Length = 1142
Score = 236 bits (119), Expect = 8e-61
Identities = 308/371 (83%)
Strand = Plus / Plus
Query: 2485 gcatctgttatctgctgccgctcgtctccgaagcaaaaagcactggtcactagactggtt 2544
||||||||||| ||||| || || ||||| |||||||||||||| || || ||||||||
Sbjct: 757 gcatctgttatatgctgtcgttcatctcccaagcaaaaagcacttgttacaagactggtg 816
Query: 2545 aaatctggaactggcaaaacgacattagctattggtgatggagctaatgatgttggaatg 2604
|| ||||||| | || || |||||||||| ||||| || |||||||||||||||
Sbjct: 817 aagagcagaactggtagtacaactctagctattggagatggggcaaatgatgttggaatg 876
Query: 2605 cttcaagaagcagatataggggttggaatcagtggtgttgaaggaatgcaggccgttatg 2664
|| ||||||||||| || ||| |||| |||||||||||||||||||||||||| ||||||
Sbjct: 877 ctccaagaagcagacattgggattggtatcagtggtgttgaaggaatgcaggctgttatg 936
Query: 2665 tctagtgatattgcaattgcacagtttcgttatttggaaaggttacttcttgtacacgga 2724
|| ||||||||||||||||| || ||||| | | |||| | ||||| || || || |||
Sbjct: 937 tcaagtgatattgcaattgcccaatttcggtttctggagcgcttactactcgtgcatgga 996
Query: 2725 cattggtgttaccagaggatctcatcaatgatatgctattttttctacaagaatatcaca 2784
|||||||||||| || |||||||||||||| ||||| || || ||||||||||||||
Sbjct: 997 cattggtgttacagaagaatctcatcaatgatctgctacttcttttacaagaatatcacc 1056
Query: 2785 tttggctttaccctattcttgtatgaggtgtatgcatcattttctggacagcctgcatac 2844
|||||||| || || ||||| | |||| ||||||| ||||| || || || ||||||||
Sbjct: 1057 tttggcttcactctcttcttctttgagatgtatgcctcattctcagggcaatctgcatac 1116
Query: 2845 aatgactggtt 2855
|||||||||||
Sbjct: 1117 aatgactggtt 1127
Score = 119 bits (60), Expect = 1e-25
Identities = 141/168 (83%)
Strand = Plus / Plus
Query: 2072 taatccttctcggtgctactgctgtagaggacaagcttcaaaatggggttcctgagtgca 2131
|||| ||||| ||||||||||| || || ||||| || ||| | ||||||||||| || |
Sbjct: 347 taattcttcttggtgctactgcagttgaagacaaactacaagacggggttcctgaatgta 406
Query: 2132 ttgacaagcttgcacaagctggaattaagatctgggttttgactggggataaaatggaga 2191
||||||| || || || ||||| |||||| | |||||||||||||| |||||||||||||
Sbjct: 407 ttgacaaactagcgcaggctgggattaagctatgggttttgactggtgataaaatggaga 466
Query: 2192 ctgccatcaatgttgggtttgcttgtagtttgcttagacaaggaatga 2239
| || || ||| |||| || ||||||||||| || |||||||||||||
Sbjct: 467 cagcaattaatattggattcgcttgtagtttactcagacaaggaatga 514
Score = 73.8 bits (37), Expect = 7e-12
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 1828 aaaggtgctgacagtgtcatgtttgaaaggcttgccaaggatgggagggagtttgaagag 1887
||||| |||||||||||||||||||| ||||| ||| |||| |||||||||||||||
Sbjct: 103 aaaggcgctgacagtgtcatgtttgatctacttgcaaagaatggaagggagtttgaagag 162
Query: 1888 aaaaccacggaacatgtaaatgaatatgctgatgcaggtttaagaaccctgatactggcg 1947
|| || | | | ||| | | ||| ||||||||| | ||||| || ||| ||||||| ||
Sbjct: 163 aagactaagcagcatattagtgagtatgctgattctggtttgaggaccttgatactcgca 222
Query: 1948 tatcgtgaacttgatga 1964
|||||||||||| ||||
Sbjct: 223 tatcgtgaacttcatga 239
>gnl|LJGI|FS351667 similar to UniRef100_A7P6M9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (24%)
Length = 793
Score = 71.9 bits (36), Expect = 3e-11
Identities = 123/152 (80%)
Strand = Plus / Minus
Query: 2089 actgctgtagaggacaagcttcaaaatggggttcctgagtgcattgacaagcttgcacaa 2148
|||||||| || ||||| || || || |||||||| | || ||||| || ||||| |||
Sbjct: 185 actgctgttgaagacaaactgcagaaaggggttccccaatgtattgataaacttgctcaa 126
Query: 2149 gctggaattaagatctgggttttgactggggataaaatggagactgccatcaatgttggg 2208
||||| | ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 125 gctggtctcaagatctgggtattgacgggggataagatggaaactgcaatcaacattgga 66
Query: 2209 tttgcttgtagtttgcttagacaaggaatgaa 2240
||||| || ||||||||| |||| || |||||
Sbjct: 65 tttgcctgcagtttgcttcgacagggcatgaa 34
>gnl|LJGI|TC82730 similar to UniRef100_A7PGK8 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 540
Score = 56.0 bits (28), Expect = 2e-06
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 2947 tttcctttgttatatcaagaaggtgtgcaaaatgtcctctttagctgg 2994
||||| || |||||||||||||| |||||||| ||||||||||||||
Sbjct: 98 tttccattattatatcaagaaggagtgcaaaacatcctctttagctgg 145
>gnl|LJGI|BW595505 similar to UniRef100_A7QX90 Cluster: Chromosome undetermined
scaffold_215, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_215, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 481
Score = 54.0 bits (27), Expect = 6e-06
Identities = 99/123 (80%)
Strand = Plus / Plus
Query: 2574 tattggtgatggagctaatgatgttggaatgcttcaagaagcagatataggggttggaat 2633
||||||||||||||| |||||||| | ||| |||||| ||| || | || ||||| ||
Sbjct: 218 tattggtgatggagccaatgatgtaagcatgattcaagcagctcatgttggtgttggcat 277
Query: 2634 cagtggtgttgaaggaatgcaggccgttatgtctagtgatattgcaattgcacagtttcg 2693
||||| | || |||||||| || || ||| |||||||| |||| ||||||||||| ||
Sbjct: 278 aagtggaatggagggaatgcaagctgtgatggctagtgattttgccattgcacagttccg 337
Query: 2694 tta 2696
|||
Sbjct: 338 tta 340