Miyakogusa Predicted Gene

Lj2g3v1182640.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1182640.1 Non Chatacterized Hit- tr|I3S3K2|I3S3K2_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,62.67,7e-16,seg,NULL; PSK,Phytosulfokine,CUFF.36383.1
         (255 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72166 similar to UniRef100_Q5IVZ8 Cluster: Phytosulfo...   505   e-143

>gnl|LJGI|TC72166 similar to UniRef100_Q5IVZ8 Cluster: Phytosulfokine; n=1; Avicennia
           marina|Rep: Phytosulfokine - Avicennia marina (Grey
           mangrove), partial (42%)
          Length = 487

 Score =  505 bits (255), Expect = e-143
 Identities = 255/255 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaaatgtggtataagctcagagttttcatggcaaccttcttcttccttttcttaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25  atgaaaatgtggtataagctcagagttttcatggcaaccttcttcttccttttcttaacc 84

                                                                       
Query: 61  ctcacatatgcaaccagacttggccctgcttcttcctctgtaatttcaaaaagtaatcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  ctcacatatgcaaccagacttggccctgcttcttcctctgtaatttcaaaaagtaatcaa 144

                                                                       
Query: 121 catggggttttggaagaggaaatgaacagcatagaggaagcttgtcaagacattggtgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 catggggttttggaagaggaaatgaacagcatagaggaagcttgtcaagacattggtgaa 204

                                                                       
Query: 181 gatgaatgcttgatgagaagaactcttgcagcacacacagactatatctatacacagaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gatgaatgcttgatgagaagaactcttgcagcacacacagactatatctatacacagaag 264

                          
Query: 241 caaaagccatgagat 255
           |||||||||||||||
Sbjct: 265 caaaagccatgagat 279