Miyakogusa Predicted Gene

Lj2g3v1172580.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1172580.3 Non Chatacterized Hit- tr|J3N0F1|J3N0F1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G2,34.17,3e-18,seg,NULL; coiled-coil,NULL,CUFF.36377.3
         (708 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68332 similar to UniRef100_A7P319 Cluster: Chromosome...   394   e-109

>gnl|LJGI|TC68332 similar to UniRef100_A7P319 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 573

 Score =  394 bits (199), Expect = e-109
 Identities = 199/199 (100%)
 Strand = Plus / Plus

                                                                       
Query: 510 gcagattgtacataagttgctcaaagatttagagttcaagcatgaagaaatgcttgacac 569
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gcagattgtacataagttgctcaaagatttagagttcaagcatgaagaaatgcttgacac 61

                                                                       
Query: 570 caaatccacactggaagctgagaaagaagctcttcagattcttagatcttgggtggagga 629
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  caaatccacactggaagctgagaaagaagctcttcagattcttagatcttgggtggagga 121

                                                                       
Query: 630 cgaggcaagaagaagccaagctcgggcagctgttcttgaagaggtagcgcgaagatggaa 689
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgaggcaagaagaagccaagctcgggcagctgttcttgaagaggtagcgcgaagatggaa 181

                              
Query: 690 atgggatgaccaagcttga 708
           |||||||||||||||||||
Sbjct: 182 atgggatgaccaagcttga 200