Miyakogusa Predicted Gene
- Lj2g3v1172540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1172540.1 Non Chatacterized Hit- tr|I1J6R6|I1J6R6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.31297
PE,81.59,0,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.36381.1
(1575 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65824 homologue to UniRef100_A7P320 Cluster: Chromoso... 1084 0.0
gnl|LJGI|BP039505 similar to UniRef100_A7P320 Cluster: Chromosom... 82 1e-14
>gnl|LJGI|TC65824 homologue to UniRef100_A7P320 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (16%)
Length = 826
Score = 1084 bits (547), Expect = 0.0
Identities = 547/547 (100%)
Strand = Plus / Plus
Query: 1029 caagcactttgattggcctgaaggtaaagcagatgcattaagggaggcagcttttgaata 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagcactttgattggcctgaaggtaaagcagatgcattaagggaggcagcttttgaata 60
Query: 1089 tcaggatctgatgaaattggagaagcgagtctccaccttcgctgatgatcccaaactctc 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaggatctgatgaaattggagaagcgagtctccaccttcgctgatgatcccaaactctc 120
Query: 1149 atgtgatgctgctctaaagaagatgtattcactccttgaaaaagtggagcaaagtgtata 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgtgatgctgctctaaagaagatgtattcactccttgaaaaagtggagcaaagtgtata 180
Query: 1209 tgcactcttgcgaacaagagatttggctatttcacggtacaaggaatttggaatcccagt 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcactcttgcgaacaagagatttggctatttcacggtacaaggaatttggaatcccagt 240
Query: 1269 aaactggttactggattcaggagttgtaggcaagatcaagctttcttctgtacaactagc 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaactggttactggattcaggagttgtaggcaagatcaagctttcttctgtacaactagc 300
Query: 1329 aaagaagtatatgaaacgtgttacctctgaacttgatgctttatctggatctgagaagga 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagaagtatatgaaacgtgttacctctgaacttgatgctttatctggatctgagaagga 360
Query: 1389 accagctagagagtttttgactctgcaaggagtacgttttgctttccgcgtccatcagtt 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accagctagagagtttttgactctgcaaggagtacgttttgctttccgcgtccatcagtt 420
Query: 1449 tgcaggaggctttgatgcagatagcatgaaagcttttgaagacctaaggaaccgcatcca 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcaggaggctttgatgcagatagcatgaaagcttttgaagacctaaggaaccgcatcca 480
Query: 1509 aacccctcaagctggtgaagataataaaccagaaacagctggtgaagataatgaatcaga 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aacccctcaagctggtgaagataataaaccagaaacagctggtgaagataatgaatcaga 540
Query: 1569 aacatag 1575
|||||||
Sbjct: 541 aacatag 547
>gnl|LJGI|BP039505 similar to UniRef100_A7P320 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 518
Score = 81.8 bits (41), Expect = 1e-14
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 1191 agtggagcaaagtgtatatgcactcttgcgaacaagagatttggctatttcacggtacaa 1250
|||| ||||||| |||||||||||| | |||| ||| ||||| ||||||||||||||||
Sbjct: 497 agtgtagcaaagcgtatatgcactcctacgaagaagtgatttaactatttcacggtacaa 438
Query: 1251 ggaatttggaatcccagtaaa 1271
||||||||||| ||| |||||
Sbjct: 437 ggaatttggaacccctgtaaa 417