Miyakogusa Predicted Gene
- Lj2g3v1172480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1172480.1 tr|Q9LI73|Q9LI73_ARATH Aspartyl protease family
protein OS=Arabidopsis thaliana GN=At3g25700 PE=2 SV,63.79,0,Acid
proteases,Peptidase aspartic; PEPSIN,Peptidase A1; seg,NULL;
Asp,Peptidase A1; no description,P,CUFF.36369.1
(1317 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77271 similar to UniRef100_Q9LI73 Cluster: Chloroplas... 1398 0.0
gnl|LJGI|TC82404 weakly similar to UniRef100_UPI00015A6D09 Clust... 301 6e-81
>gnl|LJGI|TC77271 similar to UniRef100_Q9LI73 Cluster: Chloroplast nucleoid DNA binding
protein-like; nucellin-like protein; n=1; Arabidopsis
thaliana|Rep: Chloroplast nucleoid DNA binding
protein-like; nucellin-like protein - Arabidopsis
thaliana (Mouse-ear cress), partial (44%)
Length = 1052
Score = 1398 bits (705), Expect = 0.0
Identities = 705/705 (100%)
Strand = Plus / Plus
Query: 613 gtaaccggagcaagcttcaacggcgcgcaaggagtaatgggcttgggccgtgggcccata 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtaaccggagcaagcttcaacggcgcgcaaggagtaatgggcttgggccgtgggcccata 60
Query: 673 tcattcatctctcaactgggtcgaagattcgggaacagcttctcttactgtctactcgac 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcattcatctctcaactgggtcgaagattcgggaacagcttctcttactgtctactcgac 120
Query: 733 tacaccatatcaccgcctccgaagagttacctcaccatcggcgacgtcgtttcgcagaag 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacaccatatcaccgcctccgaagagttacctcaccatcggcgacgtcgtttcgcagaag 180
Query: 793 ctaagttacactccgttgctaaacaaccctctctctcccactttttactatattgccatc 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctaagttacactccgttgctaaacaaccctctctctcccactttttactatattgccatc 240
Query: 853 gaagatgtaaccgtcgacggcgtaaaactaccgataaccgcttccgtttgggaaatcgac 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagatgtaaccgtcgacggcgtaaaactaccgataaccgcttccgtttgggaaatcgac 300
Query: 913 gaccagggtaacggcggcaccgtcgtggactccggcaccacgctgactttcttagctgag 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaccagggtaacggcggcaccgtcgtggactccggcaccacgctgactttcttagctgag 360
Query: 973 ccagcttaccggcagatcctggccgcgtttcggcggcgcgtgaggcttccggcggtggag 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccagcttaccggcagatcctggccgcgtttcggcggcgcgtgaggcttccggcggtggag 420
Query: 1033 gatccttccctggcgttcgacctctgcgtgaatgtctccggcgtggctagggtgaagttc 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatccttccctggcgttcgacctctgcgtgaatgtctccggcgtggctagggtgaagttc 480
Query: 1093 ccgaagctgaggattggtcttgccgggaaatcggtgttgtcgccgccggcgaggaactat 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccgaagctgaggattggtcttgccgggaaatcggtgttgtcgccgccggcgaggaactat 540
Query: 1153 ttcattgaggtggcggatcgggtcaagtgtttggcgatccaacccgcgaaaccgggttcc 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcattgaggtggcggatcgggtcaagtgtttggcgatccaacccgcgaaaccgggttcc 600
Query: 1213 gggttttcggttatagggaatcttatgcaacaaggttacttgtttcaatttgaagtggac 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gggttttcggttatagggaatcttatgcaacaaggttacttgtttcaatttgaagtggac 660
Query: 1273 aggtctcgggtcggattctcgcgacgcgggtgtgcggttcgttga 1317
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aggtctcgggtcggattctcgcgacgcgggtgtgcggttcgttga 705
>gnl|LJGI|TC82404 weakly similar to UniRef100_UPI00015A6D09 Cluster: semaphorin 3gb;
n=1; Danio rerio|Rep: semaphorin 3gb - Danio rerio,
partial (3%)
Length = 232
Score = 301 bits (152), Expect = 6e-81
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 1 atggcgtcacacccctctctcactctcctcattctcatcttcttcttcaacttccgcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atggcgtcacacccctctctcactctcctcattctcatcttcttcttcaacttccgcagc 105
Query: 61 tccacagaggaatacctcaagctcccattagtaaagagaaacccactatcttcaccatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tccacagaggaatacctcaagctcccattagtaaagagaaacccactatcttcaccatct 165
Query: 121 caccttctcgccgccgacatccaacgcctcaa 152
||||||||||||||||||||||||||||||||
Sbjct: 166 caccttctcgccgccgacatccaacgcctcaa 197