Miyakogusa Predicted Gene

Lj2g3v1168860.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1168860.1 tr|G7JYA5|G7JYA5_MEDTR Zinc finger-like protein
OS=Medicago truncatula GN=MTR_5g054090 PE=4 SV=1,79.37,0,zinc
finger,Zinc finger, C2H2-like; seg,NULL; AZ2-RELATED,NULL; ZINC FINGER
PROTEIN,NULL; C2H2 and C,CUFF.36347.1
         (918 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS360083 homologue to UniRef100_A7QFD3 Cluster: Chromos...    70   3e-11
gnl|LJGI|TC76316 homologue to UniRef100_A7PWB2 Cluster: Chromoso...    68   1e-10
gnl|LJGI|BP051546 homologue to UniRef100_A7PWB2 Cluster: Chromos...    54   2e-06

>gnl|LJGI|FS360083 homologue to UniRef100_A7QFD3 Cluster: Chromosome undetermined
           scaffold_87, whole genome shotgun sequence; n=2; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_87, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (17%)
          Length = 785

 Score = 69.9 bits (35), Expect = 3e-11
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 658 gattggaggacacatgagaagaactgcggcaagctctggttctgcatctgcggctctgat 717
           ||||||||||| |||||||||||||| |||||| | ||||  ||||  || ||||| |||
Sbjct: 753 gattggaggactcatgagaagaactgtggcaagttgtggtattgcacttgtggctcagat 694

                                  
Query: 718 ttcaagcacaagaggtccctcaa 740
           |||||||||||||| || |||||
Sbjct: 693 ttcaagcacaagagatctctcaa 671


>gnl|LJGI|TC76316 homologue to UniRef100_A7PWB2 Cluster: Chromosome chr8 scaffold_34,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_34, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 588

 Score = 67.9 bits (34), Expect = 1e-10
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 670 catgagaagaactgcggcaagctctggttctgcatctgcggctctgatttcaagcacaag 729
           ||||||||||| || || ||||| ||||  |||||||| || ||||||||||||||||||
Sbjct: 9   catgagaagaattgtgggaagctttggtattgcatctgtgggtctgatttcaagcacaag 68

                         
Query: 730 aggtccctcaagga 743
           ||||| || |||||
Sbjct: 69  aggtctctaaagga 82


>gnl|LJGI|BP051546 homologue to UniRef100_A7PWB2 Cluster: Chromosome chr8 scaffold_34,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_34, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (34%)
          Length = 574

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                       
Query: 653 gaggcgattggaggacacatgagaagaactgcggcaagctctggttctgcatctgcggct 712
           |||| ||||||||||| |||||||||||||| || ||||| ||||  |||   || || |
Sbjct: 365 gaggagattggaggactcatgagaagaactgtgggaagctttggtattgctcttgtgggt 306

                              
Query: 713 ctgatttcaagcacaagag 731
           | |||||||||||||||||
Sbjct: 305 ccgatttcaagcacaagag 287