Miyakogusa Predicted Gene
- Lj2g3v1168790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1168790.1 Non Chatacterized Hit- tr|I1JDV6|I1JDV6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.11,0,seg,NULL;
OS09G0306700 PROTEIN,NULL; PROSTATE TUMOR OVEREXPRESSED GENE 1
(PTOV1),NULL; Med25_VWA,Med,CUFF.36462.1
(2544 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72057 weakly similar to UniRef100_A7P346 Cluster: Chr... 1243 0.0
gnl|LJGI|TC70578 similar to UniRef100_A7P346 Cluster: Chromosome... 345 8e-94
gnl|LJGI|AV418552 weakly similar to UniRef100_Q54UJ3 Cluster: Pa... 60 7e-08
>gnl|LJGI|TC72057 weakly similar to UniRef100_A7P346 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (27%)
Length = 627
Score = 1243 bits (627), Expect = 0.0
Identities = 627/627 (100%)
Strand = Plus / Plus
Query: 1 atggctgcggagaaacagctcatcgtcgccgtcgaatgcaccgctgctatgggtccctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggctgcggagaaacagctcatcgtcgccgtcgaatgcaccgctgctatgggtccctat 60
Query: 61 tggagcaccattctcacggattaccttgagaagatcatcaggtcttttgctggaaacgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggagcaccattctcacggattaccttgagaagatcatcaggtcttttgctggaaacgag 120
Query: 121 tcaactgggcagaagccttctgcttccaacgttgagtttgccctagtcacctataatact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaactgggcagaagccttctgcttccaacgttgagtttgccctagtcacctataatact 180
Query: 181 catggatgttattctggtttccttgtgcaacggactggctggacaagagaaccagatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catggatgttattctggtttccttgtgcaacggactggctggacaagagaaccagatgtt 240
Query: 241 ttcttctcgtggctttcaggtgtacccttttctggtggtggttttaatgatggtgcaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcttctcgtggctttcaggtgtacccttttctggtggtggttttaatgatggtgcaatt 300
Query: 301 gctgaagggctttctgaagctctgatgatgttcccaaattctcaaagtggaagcccgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctgaagggctttctgaagctctgatgatgttcccaaattctcaaagtggaagcccgaat 360
Query: 361 cagcagaatgtggatattcataagcattgtatccttgtagcagcaagcaatccttatcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagcagaatgtggatattcataagcattgtatccttgtagcagcaagcaatccttatcca 420
Query: 421 ttgcagacaccagtctatgttccgcgaccacagagcctagagaagagtgaaaccattgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgcagacaccagtctatgttccgcgaccacagagcctagagaagagtgaaaccattgat 480
Query: 481 tcagacccagggaaccgtttatatgatgctgaagctgtcgctaaagcatttcctcagttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcagacccagggaaccgtttatatgatgctgaagctgtcgctaaagcatttcctcagttt 540
Query: 541 tctatttctctgtcagtcatctgccctaaacaacttcccaaagttaaagccatctacaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctatttctctgtcagtcatctgccctaaacaacttcccaaagttaaagccatctacaat 600
Query: 601 gcgggaaaacgaactagtagagcagct 627
|||||||||||||||||||||||||||
Sbjct: 601 gcgggaaaacgaactagtagagcagct 627
>gnl|LJGI|TC70578 similar to UniRef100_A7P346 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 803
Score = 345 bits (174), Expect = 8e-94
Identities = 174/174 (100%)
Strand = Plus / Plus
Query: 2371 cttccgcagttgcagcaattacagcatcaacaacttcctcaacagcagcaacagatggtt 2430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cttccgcagttgcagcaattacagcatcaacaacttcctcaacagcagcaacagatggtt 247
Query: 2431 ggggcaggaatgggtcaagcatatgttcaaggtcctgggcggtcacaaatggtttctcag 2490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggcaggaatgggtcaagcatatgttcaaggtcctgggcggtcacaaatggtttctcag 307
Query: 2491 ggacaggtatcacaaggaccaacaaacattggtggagggggcttcatgagttag 2544
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggacaggtatcacaaggaccaacaaacattggtggagggggcttcatgagttag 361
>gnl|LJGI|AV418552 weakly similar to UniRef100_Q54UJ3 Cluster: Paired amphipathic helix
(PAH) containing protein; n=1; Dictyostelium
discoideum|Rep: Paired amphipathic helix (PAH) containing
protein - Dictyostelium discoideum (Slime mold), partial
(4%)
Length = 386
Score = 60.0 bits (30), Expect = 7e-08
Identities = 47/52 (90%), Gaps = 3/52 (5%)
Strand = Plus / Plus
Query: 2397 tcaacaacttcctcaacagcagcaacagatggttggggcaggaatgggtcaa 2448
||||||||||||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 337 tcaacaacttcctca---gcatcaacagatggttggggaaggaatgggtcaa 385