Miyakogusa Predicted Gene
- Lj2g3v1168730.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1168730.4 Non Chatacterized Hit- tr|I1MRF4|I1MRF4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,51.35,0.00000000005,seg,NULL,CUFF.36336.4
(372 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB827604 similar to UniRef100_A7NW74 Cluster: Chromosom... 291 2e-78
gnl|LJGI|BP082045 121 3e-27
gnl|LJGI|TC82317 66 2e-10
gnl|LJGI|AU252126 similar to UniRef100_UPI000016335A Cluster: CH... 54 6e-07
gnl|LJGI|BP083798 50 1e-05
gnl|LJGI|TC72622 50 1e-05
>gnl|LJGI|CB827604 similar to UniRef100_A7NW74 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 548
Score = 291 bits (147), Expect = 2e-78
Identities = 154/155 (99%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 93 tcatgcttccattgctgtttt-tgttgccattaatcttgctactgctgacattgacattc 151
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcatgcttccattgctgttttttgttgccattaatcttgctactgctgacattgacattc 60
Query: 152 tttatcacagtgactggttgacctataagctcaagatcaggctcataggattcgccagaa 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttatcacagtgactggttgacctataagctcaagatcaggctcataggattcgccagaa 120
Query: 212 gaaagaagttgaagtttacatattctgctcagagg 246
|||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaagaagttgaagtttacatattctgctcagagg 155
>gnl|LJGI|BP082045
Length = 332
Score = 121 bits (61), Expect = 3e-27
Identities = 64/65 (98%)
Strand = Plus / Minus
Query: 244 aggcttggctattcaatatttgctcacaacaaatatcatcggatgaagaagaacctttgg 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 332 aggcttggctattcaatatttgctcacaacaaatatcatcgaatgaagaagaacctttgg 273
Query: 304 tgttt 308
|||||
Sbjct: 272 tgttt 268
>gnl|LJGI|TC82317
Length = 879
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 268 cacaacaaatatcatcggatgaagaagaacctttggtgttt 308
|||||||||||||||| |||||||||||||| |||||||||
Sbjct: 470 cacaacaaatatcatctgatgaagaagaaccattggtgttt 510
>gnl|LJGI|AU252126 similar to UniRef100_UPI000016335A Cluster: CHR11
(CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase;
n=1; Arabidopsis thaliana|Rep: CHR11
(CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase
- Arabidopsis thaliana, partial (5%)
Length = 350
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 46 ggataccaacattcccgcatagaagacaatattgatggagaacatcg 92
||||||||| ||||| |||| || ||||||| |||||||||||||||
Sbjct: 297 ggataccaatattcctgcattgatgacaatactgatggagaacatcg 343
>gnl|LJGI|BP083798
Length = 336
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 268 cacaacaaatatcatcggatgaagaagaa 296
|||||||||||||||| ||||||||||||
Sbjct: 316 cacaacaaatatcatctgatgaagaagaa 288
>gnl|LJGI|TC72622
Length = 563
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 268 cacaacaaatatcatcggatgaagaagaa 296
|||||||||||||||| ||||||||||||
Sbjct: 180 cacaacaaatatcatcagatgaagaagaa 208