Miyakogusa Predicted Gene
- Lj2g3v1155320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1155320.1 tr|B9HJ23|B9HJ23_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_564524 PE=4
SV=1,83.17,0,(Trans)glycosidases,Glycoside hydrolase, superfamily;
GLYCOSYL_HYDROL_F31_1,Glycoside hydrolase,
fam,NODE_67577_length_898_cov_12.286192.path1.1
(930 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76690 similar to UniRef100_A7P375 Cluster: Chromosome... 1041 0.0
gnl|LJGI|AU089155 similar to UniRef100_A7P375 Cluster: Chromosom... 381 e-105
gnl|LJGI|AV421625 homologue to UniRef100_Q9ZP04 Cluster: Alpha-D... 224 8e-58
>gnl|LJGI|TC76690 similar to UniRef100_A7P375 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 2131
Score = 1041 bits (525), Expect = 0.0
Identities = 652/693 (94%), Gaps = 6/693 (0%)
Strand = Plus / Plus
Query: 241 gtgatctggaaagtcagtggatacagggacttaactctcaacccaaccaactaccctcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgatctggaaagtcagtggatacagggacttaactctcaacccaaccaactaccctcgt 60
Query: 301 ccaaagcttttaaacttcctcaacaagatacacagtattggcatgaaactcgttgtcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaaagcttttaaacttcctcaacaagatacacagtattggcatgaaactcgttgtcatt 120
Query: 361 attgaccccggtattgctgttaactccagtttcggtgtataccaaaggggtatagctaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgaccccggtattgctgttaactccagtttcggtgtataccaaaggggtatagctaat 180
Query: 421 gatgtatttatcaagtatgaaggagaaccttacttggctcaagtttggccaggggcagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgtatttatcaagtatgaaggagaaccttacttggctcaagtttggccaggggcagtg 240
Query: 481 aactttcctgattttctcaatccaaaaacggtttcttggtggggtgatgaaatccgtcgc 540
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 241 aacttccctgattttctcaatccaaaaacagtttcttggtggggtgatgaaatccgtcgc 300
Query: 541 ttccatgaacttgttcctggtgatggcctatggcttgacatgaatgaagcttcaaatttc 600
||||||||||| ||||||| ||||||||||||| |||| |||||||||||||||||||||
Sbjct: 301 ttccatgaactcgttcctgttgatggcctatggattgatatgaatgaagcttcaaatttc 360
Query: 601 tgttctggaaagtgcaaaattcctaacggaaaggtgtgctc---tggaacagaaacttca 657
|||||||||||||||||||||||||| |||||||||||| | |||||||| | || |
Sbjct: 361 tgttctggaaagtgcaaaattcctaagggaaaggtgtgccctagtggaacaggacctgga 420
Query: 658 tcggtatattgttgcttggaatgcgagaaccttaacaaaactcgatgggacgatcctccc 717
| |||| |||||| |||| ||| ||||| ||| |||||| || |||||||||||||||
Sbjct: 421 tgggta---tgttgcctggactgcaagaacattaccaaaacccggtgggacgatcctccc 477
Query: 718 tataaaataaatgcctcaggaatacaagctcctattggctacaagacaatagccactagt 777
|| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 478 tacaaaataaacgcctcaggaatacaagctcctattggatacaagacaatagccaccagt 537
Query: 778 gcagtccactataatggaattttggagtatgatgctcacagtatatatggtttctctcaa 837
||||||||||| || || |||||||||||||||||||||| || |||||||||||||||
Sbjct: 538 gcagtccactacaacggcgttttggagtatgatgctcacagcatttatggtttctctcaa 597
Query: 838 tccattgcaactcacaaggcccttctaggccttgaaggtaaaaggccttttattttgtcg 897
||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 598 tccgttgcaactcacaaggggcttctaggccttgaaggcaaaaggccttttattttgtcg 657
Query: 898 cgctcaacttatgtcggttcaggcaaatatgct 930
|||||||||||||| ||||||||||||||||||
Sbjct: 658 cgctcaacttatgttggttcaggcaaatatgct 690
>gnl|LJGI|AU089155 similar to UniRef100_A7P375 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 451
Score = 381 bits (192), Expect = e-105
Identities = 341/393 (86%), Gaps = 15/393 (3%)
Strand = Plus / Plus
Query: 11 tttacacgggaacctctctgacgtacaagattattggaggtgtatttgatttttacttgt 70
||||||| ||||||||| |||| |||||| |||||||||||||||||||||||||||| |
Sbjct: 14 tttacacaggaacctctttgacatacaaggttattggaggtgtatttgatttttacttct 73
Query: 71 tttctgggccttcacctttgaacgttgttgatcagtacacttccttaattggaagaccgg 130
||||||| ||||| ||||||| |||||||||||||||||||| || ||||||| ||| |
Sbjct: 74 tttctggtccttcgcctttgantgttgttgatcagtacacttctttgattggaanaccag 133
Query: 131 ctccaatgccttactgggctttcggtttccaccaatccagactg---tatcacaacttat 187
|||||||||||||||||||||| ||||||||||||| |||| | |||||||||||||
Sbjct: 134 ctccaatgccttactgggcttttggtttccaccaatgcagatggggatatcacaacttat 193
Query: 188 cagtggtagaagatgttgtggagaattacaagaaggctctaattccacttgatgtgatct 247
|||||||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||
Sbjct: 194 cagtggtagaagatgttgtggagagttacaagaangctcaaatcccacttgatgtgatct 253
Query: 248 ggaaag-------tca-----gtggatacagggacttaactctcaacccaaccaactacc 295
|||| | ||| |||| ||| |||||| ||||||||||||| ||||||||
Sbjct: 254 ggaacgatgatgatcacatggatggacacaaggacttcactctcaacccaaacaactacc 313
Query: 296 ctcgtccaaagcttttaaacttcctcaacaagatacacagtattggcatgaaactcgttg 355
||||||| |||||||| |||||||||||||| ||||||||||||||||||||| | |||
Sbjct: 314 ctcgtccnaagcttttgaacttcctcaacaanatacacagtattggcatgaaatacattg 373
Query: 356 tcattattgaccccggtattgctgttaactcca 388
|||||||||||||| | |||| |||| ||||||
Sbjct: 374 tcattattgaccccngaattggtgttnactcca 406
>gnl|LJGI|AV421625 homologue to UniRef100_Q9ZP04 Cluster: Alpha-D-xylosidase
precursor; n=1; Tropaeolum majus|Rep: Alpha-D-xylosidase
precursor - Tropaeolum majus (Common nasturtium),
partial (6%)
Length = 172
Score = 224 bits (113), Expect = 8e-58
Identities = 155/169 (91%)
Strand = Plus / Plus
Query: 358 attattgaccccggtattgctgttaactccagtttcggtgtataccaaaggggtatagct 417
|||||||||||||| |||| |||||||||||||| ||||||||| ||||| |||||
Sbjct: 4 attattgaccccggaattggtgttaactccagttatggtgtatacacgaggggattagct 63
Query: 418 aatgatgtatttatcaagtatgaaggagaaccttacttggctcaagtttggccaggggca 477
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 64 aatgatgtatttatcaagtatgaaggtgaaccttacttggctcaagtttggccaggggca 123
Query: 478 gtgaactttcctgattttctcaatccaaaaacggtttcttggtggggtg 526
|| ||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct: 124 gttaacttccctgattttctcaatccaaagacagtttcttggtggggtg 172