Miyakogusa Predicted Gene

Lj2g3v1141850.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1141850.1 Non Chatacterized Hit- tr|F6HFN6|F6HFN6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,62.26,0.00000002, ,CUFF.36420.1
         (384 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BE...    58   4e-08
gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BE...    56   2e-07

>gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BEE 3; n=1;
           Arabidopsis thaliana|Rep: Protein BEE 3 - Arabidopsis
           thaliana (Mouse-ear cress), partial (41%)
          Length = 1161

 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 259 gagaaacaaaatgaagttatccatgtaagagcaaaaagaggtcaagcaaccaatagccac 318
           |||||| |||| |||||  | ||||| ||||| | |||||||||||| ||  |||| |||
Sbjct: 485 gagaaagaaaaggaagtggttcatgtcagagccagaagaggtcaagctactgatagtcac 544

                            
Query: 319 agtttagcagaaagggt 335
           |||||||||||||||||
Sbjct: 545 agtttagcagaaagggt 561


>gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BEE 1; n=1;
           Arabidopsis thaliana|Rep: Protein BEE 1 - Arabidopsis
           thaliana (Mouse-ear cress), partial (39%)
          Length = 998

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 280 catgtaagagcaaaaagaggtcaagcaaccaatagccacagtttagcagaaagggt 335
           ||||| ||||| | |||||||||||| ||  |||| ||||||||||||||||||||
Sbjct: 501 catgttagagccagaagaggtcaagctactgatagtcacagtttagcagaaagggt 556