Miyakogusa Predicted Gene
- Lj2g3v1105370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1105370.1 Non Chatacterized Hit- tr|I3SPW4|I3SPW4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,81.6,0,SRF-like,Transcription factor, MADS-box;
MADS_BOX_1,Transcription factor, MADS-box;
coiled-coil,NULL,gene.g40837.t1.1
(660 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63015 similar to UniRef100_Q3Y4G8 Cluster: MADS-box p... 930 0.0
gnl|LJGI|GO011170 similar to UniRef100_Q56NI4 Cluster: MADS box ... 347 5e-95
gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box p... 347 5e-95
gnl|LJGI|GO024192 similar to UniRef100_Q8LLR1 Cluster: MADS-box ... 101 5e-21
gnl|LJGI|TC68434 UniRef100_Q533S6 Cluster: MADS box protein SEP3... 92 5e-18
gnl|LJGI|TC76874 UniRef100_Q533S8 Cluster: MADS box protein AP1a... 80 2e-14
gnl|LJGI|TC72723 homologue to UniRef100_Q3Y4G8 Cluster: MADS-box... 80 2e-14
gnl|LJGI|BP062958 homologue to UniRef100_Q3KSZ0 Cluster: MADS-bo... 78 8e-14
gnl|LJGI|TC75220 homologue to UniRef100_A1XG54 Cluster: SOC1; n=... 74 1e-12
gnl|LJGI|FS335696 similar to UniRef100_Q67BK3 Cluster: AGL15; n=... 66 3e-10
gnl|LJGI|BP064158 similar to UniRef100_A7NU52 Cluster: Chromosom... 64 1e-09
gnl|LJGI|GO037100 homologue to UniRef100_A0EIX6 Cluster: Transcr... 60 2e-08
gnl|LJGI|TC65119 homologue to UniRef100_Q533R9 Cluster: MADS box... 58 7e-08
gnl|LJGI|TC60537 similar to UniRef100_Q7Y1U9 Cluster: SVP-like f... 52 4e-06
gnl|LJGI|TC57459 UniRef100_Q533R8 Cluster: MADS box protein AGL1... 52 4e-06
>gnl|LJGI|TC63015 similar to UniRef100_Q3Y4G8 Cluster: MADS-box protein; n=1; Glycine
max|Rep: MADS-box protein - Glycine max (Soybean),
partial (64%)
Length = 681
Score = 930 bits (469), Expect = 0.0
Identities = 475/477 (99%)
Strand = Plus / Plus
Query: 184 agctaccgtgagtacttgaagctgaaagcaagatttgaatctcttcaaaggacccagaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 agctaccgtgagtacttgaagctgaaagcaagatttgaatctcttcaaaggacccagaga 84
Query: 244 aaccttctaggtgaagacttgggccccttaaatagcaaagaactcgagcagcttgagcgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 aaccttctaggtgaagacttgggccccttaaatagcaaagaactcgagcagcttgagcgg 144
Query: 304 caactagatgcatctctgaagcaagtgaggtccacaaagacccaattcatgctggaccag 363
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 145 caactagatgcatctctgaagcaagtgaggtccacaaagacccaattcatgccggaccag 204
Query: 364 ttagctgatcttcaaaataaggagcacatgttaatagaagcaaacagagctttgaacctg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttagctgatcttcaaaataaggagcacatgttaatagaagcaaacagagctttgaacctg 264
Query: 424 aagttggaagaaatcaactcaagcaaccattataggcaaacatgggaagctggtgatcaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagttggaagaaatcaactcaagcaaccattataggcaaacatgggaagctggtgatcaa 324
Query: 484 agcatggcatatggtaaccagaatgctccttctcaaagcttcttccaacctttggagtgc 543
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 agcatggcatatggtaaccagaatgcttcttctcaaagcttcttccaacctttggagtgc 384
Query: 544 aatcccacattacagataggtactgattacaggtacagtcctgtagcttcagatcagcta 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatcccacattacagataggtactgattacaggtacagtcctgtagcttcagatcagcta 444
Query: 604 aatgccacaactcaacctcaacaagtgaatggtttcattcctggatggatgctttga 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatgccacaactcaacctcaacaagtgaatggtttcattcctggatggatgctttga 501
>gnl|LJGI|GO011170 similar to UniRef100_Q56NI4 Cluster: MADS box protein M6; n=1;
Pisum sativum|Rep: MADS box protein M6 - Pisum sativum
(Garden pea), partial (74%)
Length = 698
Score = 347 bits (175), Expect = 5e-95
Identities = 407/483 (84%), Gaps = 6/483 (1%)
Strand = Plus / Plus
Query: 184 agctaccgtgagtacttgaagctgaaagcaagatttgaatctcttcaaaggacccagaga 243
||||||||||| ||||| |||||||||| ||||||||||||||| ||||| |||||||||
Sbjct: 157 agctaccgtgaatacttaaagctgaaaggaagatttgaatctctgcaaagaacccagaga 216
Query: 244 aaccttctaggtgaagacttgggccccttaaatagcaaagaactcgagcagcttgagcgg 303
||||||||||| || ||||||||||| | ||||||||||| || ||||||||||| |||
Sbjct: 217 aaccttctaggggaggacttgggcccgcttaatagcaaagatcttgagcagcttgaacgg 276
Query: 304 caactagatgcatctctgaagcaagtgaggtccacaaagacccaattcatgctggaccag 363
||| | || ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 277 caattggactcatctctgaagcaagtgaggtccacaaagacacaattcatgctggaccag 336
Query: 364 ttagctgatcttcaaaataaggagcacatgttaatagaagcaaacagagctttgaacctg 423
|| |||||||||||||||||||||| ||||| |||||||||||||| | ||| ||
Sbjct: 337 ttgtctgatcttcaaaataaggagcagatgttggtagaagcaaacagatccttgtcagtg 396
Query: 424 aagttggaagaaatcaactcaagcaaccattataggcaaacatggg---aagctggtgat 480
||| |||| || ||||| ||||| || || || |||||| |||||| |||||||||||
Sbjct: 397 aagctggatgatatcaattcaagaaatcactacaggcaatcatgggatcaagctggtgat 456
Query: 481 caaagcatggcata---tggtaaccagaatgctccttctcaaagcttcttccaacctttg 537
||||||||| || |||| || ||||||| ||||| |||||||||| || |||
Sbjct: 457 caaagcatgcagtatggtggttcacaaaatgctcactctcagggcttcttccagccattg 516
Query: 538 gagtgcaatcccacattacagataggtactgattacaggtacagtcctgtagcttcagat 597
|| ||||| |||||||| ||||| ||| |||| || ||||||| | ||| |||||||||
Sbjct: 517 gaatgcaaccccacattgcagattggttctgactataggtacaatggtgtggcttcagat 576
Query: 598 cagctaaatgccacaactcaacctcaacaagtgaatggtttcattcctggatggatgctt 657
||| | ||| ||||||||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 577 cagatggctgcaacaactcaagctcaacaagtgaatgggtttattcctggatggatgctt 636
Query: 658 tga 660
|||
Sbjct: 637 tga 639
>gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box protein M6; n=1; Pisum
sativum|Rep: MADS box protein M6 - Pisum sativum (Garden
pea), complete
Length = 1276
Score = 347 bits (175), Expect = 5e-95
Identities = 407/483 (84%), Gaps = 6/483 (1%)
Strand = Plus / Plus
Query: 184 agctaccgtgagtacttgaagctgaaagcaagatttgaatctcttcaaaggacccagaga 243
||||||||||| ||||| |||||||||| ||||||||||||||| ||||| |||||||||
Sbjct: 577 agctaccgtgaatacttaaagctgaaaggaagatttgaatctctgcaaagaacccagaga 636
Query: 244 aaccttctaggtgaagacttgggccccttaaatagcaaagaactcgagcagcttgagcgg 303
||||||||||| || ||||||||||| | ||||||||||| || ||||||||||| |||
Sbjct: 637 aaccttctaggggaggacttgggcccgcttaatagcaaagatcttgagcagcttgaacgg 696
Query: 304 caactagatgcatctctgaagcaagtgaggtccacaaagacccaattcatgctggaccag 363
||| | || ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 697 caattggactcatctctgaagcaagtgaggtccacaaagacacaattcatgctggaccag 756
Query: 364 ttagctgatcttcaaaataaggagcacatgttaatagaagcaaacagagctttgaacctg 423
|| |||||||||||||||||||||| ||||| |||||||||||||| | ||| ||
Sbjct: 757 ttgtctgatcttcaaaataaggagcagatgttggtagaagcaaacagatccttgtcagtg 816
Query: 424 aagttggaagaaatcaactcaagcaaccattataggcaaacatggg---aagctggtgat 480
||| |||| || ||||| ||||| || || || |||||| |||||| |||||||||||
Sbjct: 817 aagctggatgatatcaattcaagaaatcactacaggcaatcatgggatcaagctggtgat 876
Query: 481 caaagcatggcata---tggtaaccagaatgctccttctcaaagcttcttccaacctttg 537
||||||||| || |||| || ||||||| ||||| |||||||||| || |||
Sbjct: 877 caaagcatgcagtatggtggttcacaaaatgctcactctcagggcttcttccagccattg 936
Query: 538 gagtgcaatcccacattacagataggtactgattacaggtacagtcctgtagcttcagat 597
|| ||||| |||||||| ||||| ||| |||| || ||||||| | ||| |||||||||
Sbjct: 937 gaatgcaaccccacattgcagattggttctgactataggtacaatggtgtggcttcagat 996
Query: 598 cagctaaatgccacaactcaacctcaacaagtgaatggtttcattcctggatggatgctt 657
||| | ||| ||||||||| |||||||||||||||| || ||||||||||||||||||
Sbjct: 997 cagatggctgcaacaactcaagctcaacaagtgaatgggtttattcctggatggatgctt 1056
Query: 658 tga 660
|||
Sbjct: 1057 tga 1059
Score = 266 bits (134), Expect = 2e-70
Identities = 173/186 (93%)
Strand = Plus / Plus
Query: 1 atggggaggggaagagtggaactgaaaaggatagagaacaagataaacaggcaggttact 60
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 310 atggggagaggaagagtggagctgaagaggatagagaacaagataaacaggcaagttaca 369
Query: 61 tttgctaagaggaggaatgggcttctcaagaaagcctatgagctttctgttctctgtgat 120
||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 370 tttgcaaagaggagaaatgggcttctcaagaaagcttatgagctttctgttctctgtgat 429
Query: 121 gctgaggttgctcttatcatcttctctaaccgtggcaagctttatgagttttgtagcagc 180
||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||
Sbjct: 430 gctgaggttgctcttattgtcttctccactcgtggcaagctttatgagttttgtagcagc 489
Query: 181 tctagc 186
||||||
Sbjct: 490 tctagc 495
>gnl|LJGI|GO024192 similar to UniRef100_Q8LLR1 Cluster: MADS-box protein 3; n=1; Vitis
vinifera|Rep: MADS-box protein 3 - Vitis vinifera
(Grape), partial (53%)
Length = 482
Score = 101 bits (51), Expect = 5e-21
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 13 agagtggaactgaaaaggatagagaacaagataaacaggcaggttacttttgctaagagg 72
||||| || ||||| |||||||||||||| || ||| | ||||||||||| | || |||
Sbjct: 107 agagttgagctgaagaggatagagaacaaaatcaaccgccaggttactttctccaaaagg 166
Query: 73 aggaatgggcttctcaagaaagcctatgagctttctgttctctgtgatgctgaggttgct 132
|||||||| | ||||||||||| | |||||| || |||| ||||||||||||||||||
Sbjct: 167 aggaatggtttgctcaagaaagcatgtgagctctcaattctgtgtgatgctgaggttgct 226
Query: 133 cttatcatcttctctaaccgtggcaagctttatga 167
|| ||||| ||||| | |||||| ||||| |||||
Sbjct: 227 ctcatcattttctcaagccgtgggaagctctatga 261
>gnl|LJGI|TC68434 UniRef100_Q533S6 Cluster: MADS box protein SEP3; n=1; Lotus
japonicus|Rep: MADS box protein SEP3 - Lotus japonicus,
complete
Length = 1153
Score = 91.7 bits (46), Expect = 5e-18
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 1 atggggaggggaagagtggaactgaaaaggatagagaacaagataaacaggcaggttact 60
|||||||| ||||||||||| ||||| || || ||||||||||| |||||||| || ||
Sbjct: 46 atggggagaggaagagtggagctgaagagaattgagaacaagatcaacaggcaagtgacc 105
Query: 61 tttgctaagaggaggaatgggcttctcaagaaagcctatgagctttctgttctctgtgat 120
|| ||||| | ||||| || || | |||||||| ||||| ||||| ||||| || |||
Sbjct: 106 ttcgctaaacgcaggaacggactattgaagaaagcttatgaactttccgttctttgcgat 165
Query: 121 gctgaggttgctcttatcatcttctc 146
|| ||||||||||| |||||||||||
Sbjct: 166 gcggaggttgctctcatcatcttctc 191
Score = 67.9 bits (34), Expect = 8e-11
Identities = 157/198 (79%)
Strand = Plus / Plus
Query: 196 tacttgaagctgaaagcaagatttgaatctcttcaaaggacccagagaaaccttctaggt 255
|||||||||||||||||| | | |||| | || ||| | ||||||| |||||| | ||
Sbjct: 331 tacttgaagctgaaagcacgttatgaagccctacaacgctcccagaggaaccttatgggg 390
Query: 256 gaagacttgggccccttaaatagcaaagaactcgagcagcttgagcggcaactagatgca 315
||||| | ||||| |||| |||||||| || ||| |||||| |||| |||||| ||
Sbjct: 391 gaagatctaggccctctaaacagcaaagagctggagtcacttgagaggcagctagattca 450
Query: 316 tctctgaagcaagtgaggtccacaaagacccaattcatgctggaccagttagctgatctt 375
|| |||||||| | || || |||| |||||||||||||||||| ||| | ||||||||
Sbjct: 451 tccttgaagcaaataagatctacaaggacccaattcatgctggatcagctctctgatctt 510
Query: 376 caaaataaggagcacatg 393
||| |||||| ||||||
Sbjct: 511 caacgtaaggaacacatg 528
>gnl|LJGI|TC76874 UniRef100_Q533S8 Cluster: MADS box protein AP1a; n=1; Lotus
japonicus|Rep: MADS box protein AP1a - Lotus japonicus,
complete
Length = 1382
Score = 79.8 bits (40), Expect = 2e-14
Identities = 106/128 (82%)
Strand = Plus / Plus
Query: 1 atggggaggggaagagtggaactgaaaaggatagagaacaagataaacaggcaggttact 60
||||| ||||| ||||| | ||||| ||||||||||||||||| || ||||||| |||
Sbjct: 291 atgggaaggggtagagttcagctgaagaggatagagaacaagatcaatcggcaggtaact 350
Query: 61 tttgctaagaggaggaatgggcttctcaagaaagcctatgagctttctgttctctgtgat 120
|| | || ||||| |||||||||||||||||| ||||| | ||||||||||| |||
Sbjct: 351 ttctccaaaaggagagctgggcttctcaagaaagctcatgagatctctgttctctgcgat 410
Query: 121 gctgaggt 128
||||||||
Sbjct: 411 gctgaggt 418
>gnl|LJGI|TC72723 homologue to UniRef100_Q3Y4G8 Cluster: MADS-box protein; n=1;
Glycine max|Rep: MADS-box protein - Glycine max
(Soybean), partial (22%)
Length = 573
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 589 gcttcagatcagctaaatgccacaactcaacctcaacaagtgaatggtttcattcctgga 648
|||||||||||| | ||| ||||||||| |||||||||||||||| || |||||||||
Sbjct: 295 gcttcagatcagatggctgcaacaactcaagctcaacaagtgaatgggtttattcctgga 354
Query: 649 tggatgctttga 660
||||||||||||
Sbjct: 355 tggatgctttga 366
>gnl|LJGI|BP062958 homologue to UniRef100_Q3KSZ0 Cluster: MADS-box transcription
factor; n=1; Prunus dulcis|Rep: MADS-box transcription
factor - Prunus dulcis (Almond) (Prunus amygdalus),
partial (15%)
Length = 484
Score = 77.8 bits (39), Expect = 8e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 184 agctaccgtgagtacttgaagctgaaagcaagatttgaatctcttcaaaggacccagag 242
||||||||||| ||||| |||||||||| ||||||||||||||| ||||| ||||||||
Sbjct: 175 agctaccgtgaatacttaaagctgaaaggaagatttgaatctctgcaaagaacccagag 233
>gnl|LJGI|TC75220 homologue to UniRef100_A1XG54 Cluster: SOC1; n=1; Glycine max|Rep:
SOC1 - Glycine max (Soybean), partial (35%)
Length = 555
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 79 gggcttctcaagaaagcctatgagctttctgttctctgtgatgctgaggttgctcttatc 138
|||||||| ||||| |||| |||||||||||| || ||||| |||||||| ||||| |||
Sbjct: 410 gggcttctgaagaaggcctttgagctttctgtgctttgtgaggctgaggtagctctcatc 469
Query: 139 atcttctct 147
|||||||||
Sbjct: 470 atcttctct 478
>gnl|LJGI|FS335696 similar to UniRef100_Q67BK3 Cluster: AGL15; n=1; Glycine max|Rep:
AGL15 - Glycine max (Soybean), partial (66%)
Length = 772
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 110 ttctctgtgatgctgaggttgctcttatcatcttctc 146
||||||||||||||||||||||| |||||||||||||
Sbjct: 372 ttctctgtgatgctgaggttgctgttatcatcttctc 408
>gnl|LJGI|BP064158 similar to UniRef100_A7NU52 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 394
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 67 aagaggaggaatgggcttctcaagaaagcctatgagctttctgttctctgtg 118
||||||||||||||||| |||||||||| ||||| ||||||||||| ||||
Sbjct: 231 aagaggaggaatgggctgatcaagaaagcttatgaactttctgttctttgtg 282
>gnl|LJGI|GO037100 homologue to UniRef100_A0EIX6 Cluster: Transcription factor AGL20;
n=1; Ipomoea batatas|Rep: Transcription factor AGL20 -
Ipomoea batatas (Sweet potato) (Batate), partial (33%)
Length = 371
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 76 aatgggcttctcaagaaagcctatgagctttctgttctctgtgatgctgaggttgctctt 135
|||||| | |||||||| || | ||||||||| ||||| |||||||||||||| ||||||
Sbjct: 222 aatgggttgctcaagaaggcatttgagctttcagttctgtgtgatgctgaggtggctctt 281
Query: 136 at 137
||
Sbjct: 282 at 283
>gnl|LJGI|TC65119 homologue to UniRef100_Q533R9 Cluster: MADS box protein AGL1; n=1;
Lotus japonicus|Rep: MADS box protein AGL1 - Lotus
japonicus, complete
Length = 1053
Score = 58.0 bits (29), Expect = 7e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 92 aagcctatgagctttctgttctctgtgatgctgaggttgctcttatcatcttctctaacc 151
|||| |||||||| |||||||| ||||||||||| |||||||| || ||||||| | ||
Sbjct: 184 aagcttatgagctatctgttctgtgtgatgctgaagttgctctcattgtcttctcaagcc 243
Query: 152 gtggc 156
|||||
Sbjct: 244 gtggc 248
>gnl|LJGI|TC60537 similar to UniRef100_Q7Y1U9 Cluster: SVP-like floral repressor;
n=1; Eucalyptus occidentalis|Rep: SVP-like floral
repressor - Eucalyptus occidentalis, partial (94%)
Length = 1471
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 86 tcaagaaagcctatgagctttctgttctctgtgatgctgaggttgc 131
|||||||||| | |||||||| ||||||||||||||||| |||||
Sbjct: 613 tcaagaaagctgaagagctttcagttctctgtgatgctgatgttgc 658
>gnl|LJGI|TC57459 UniRef100_Q533R8 Cluster: MADS box protein AGL11; n=1; Lotus
japonicus|Rep: MADS box protein AGL11 - Lotus japonicus,
complete
Length = 983
Score = 52.0 bits (26), Expect = 4e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 79 gggcttctcaagaaagcctatgagctttctgttctctgtgatgctgaggttgctcttatc 138
|||||||| |||||||| |||||||| || || || ||||||||||| ||||| || ||
Sbjct: 162 gggcttctgaagaaagcttatgagctatcagtgctgtgtgatgctgaagttgccctcatt 221
Query: 139 atcttctctaaccgtggc 156
||||||| | |||||||
Sbjct: 222 gtcttctccagccgtggc 239