Miyakogusa Predicted Gene

Lj2g3v1079650.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1079650.1 tr|B9H443|B9H443_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_759466 PE=4 SV=1,50.47,3e-18,
,CUFF.36215.1
         (393 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59005 weakly similar to UniRef100_A7PAA4 Cluster: Chr...   779   0.0  

>gnl|LJGI|TC59005 weakly similar to UniRef100_A7PAA4 Cluster: Chromosome chr14
           scaffold_9, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (56%)
          Length = 793

 Score =  779 bits (393), Expect = 0.0
 Identities = 393/393 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagacaccacgctcaaaacacctccaaaaatcccaattgaagctcaatcaaccgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atggaagacaccacgctcaaaacacctccaaaaatcccaattgaagctcaatcaaccgag 196

                                                                       
Query: 61  cctgaatgcaaaaccccaactccaattccacaaccaccccagaatgatgatcctaattcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cctgaatgcaaaaccccaactccaattccacaaccaccccagaatgatgatcctaattcc 256

                                                                       
Query: 121 actgatgaactccgcaaatctctcatcccagatcctcttagagtccccaaagcattcaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 actgatgaactccgcaaatctctcatcccagatcctcttagagtccccaaagcattcaaa 316

                                                                       
Query: 181 ttcccagaaaggtatacaagtccaactgattcgatcatgtcgccggtaaccaaaggtctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttcccagaaaggtatacaagtccaactgattcgatcatgtcgccggtaaccaaaggtctt 376

                                                                       
Query: 241 ctagctagaggcaaaaagggtgtggcaaaattaccacctggtaaatatcatccaaagatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctagctagaggcaaaaagggtgtggcaaaattaccacctggtaaatatcatccaaagatt 436

                                                                       
Query: 301 ccagacatgagcttgcaggaagtgggtccttttcagaacaacaaggttccaattccaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ccagacatgagcttgcaggaagtgggtccttttcagaacaacaaggttccaattccaatg 496

                                            
Query: 361 ttgattgatgagaggatcaactcaatttgagga 393
           |||||||||||||||||||||||||||||||||
Sbjct: 497 ttgattgatgagaggatcaactcaatttgagga 529