Miyakogusa Predicted Gene
- Lj2g3v1079640.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1079640.1 Non Chatacterized Hit- tr|I1LWS1|I1LWS1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.45,0,WD40
repeats,WD40 repeat; WD40,WD40 repeat; NLE,NLE; WD_REPEATS_1,WD40
repeat, conserved site; no de,CUFF.36219.1
(1305 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71846 similar to UniRef100_A7PA93 Cluster: Chromosome... 1372 0.0
gnl|LJGI|TC65900 similar to UniRef100_A7PA93 Cluster: Chromosome... 870 0.0
gnl|LJGI|FS359143 similar to UniRef100_A7PA93 Cluster: Chromosom... 200 2e-50
>gnl|LJGI|TC71846 similar to UniRef100_A7PA93 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 804
Score = 1372 bits (692), Expect = 0.0
Identities = 711/720 (98%)
Strand = Plus / Plus
Query: 1 atggccgaagacggtggtgaagttagcaccaggaggatccaagtgcgcttggtgacgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atggccgaagacggtggtgaagttagcaccaggaggatccaagtgcgcttggtgacgaag 144
Query: 61 ttggatgaaccctacaaagttccgaccgccgccatcgctatccccgccgacctcaccaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 ttggatgaaccctacaaagttccgaccgccgccatcgctatccccgccgacctcaccaga 204
Query: 121 ctcggcctctcctccattgtcaacgcccttctccgaaacaaagacgctgatcataatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctcggcctctcctccattgtcaacgcccttctccgaaacaaagacgctgatcataatcct 264
Query: 181 gaaccctttgatttcttgattgatggcgagttcgttcgtatgtcgcttgagcagtttctt 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 gaaccctttgatttcttgattgatggcgagtttgttcgtatgtcgcttgagcagtttctt 324
Query: 241 ctcgctaaaggaatttccacggaaaggacattggaaattgagtacacaagggttgtagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcgctaaaggaatttccacggaaaggacattggaaattgagtacacaagggttgtagcc 384
Query: 301 ccacgaaaggaggaagacccttctctacatgatgactgggtcagtgctgttgatggttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccacgaaaggaggaagacccttctctacatgatgactgggtcagtgctgttgatggttct 444
Query: 361 tcttctcggnnnnnnnngactgggtgttatgatggtttgggaagggtatggaaaggtgct 420
||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcttctcggttttttttgactgggtgttatgatggtttgggaagggtatggaaaggtgct 504
Query: 421 ggattatgttcccatatattggaaggacatagcgacgctgtctcttctgtttgtatcgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggattatgttcccatatattggaaggacatagcgacgctgtctcttctgtttgtatcgtt 564
Query: 481 aatccagaaggtgagcaaactgttactatagctactgcttcgaaagaccggacactaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatccagaaggtgagcaaactgttactatagctactgcttcgaaagaccggacactaagg 624
Query: 541 ctatggaagctcaataccaatgaggctgtcaacactcctacaagggttagggctttcaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctatggaagctcaataccaatgaggctgtcaacactcctacaagggttagggctttcaaa 684
Query: 601 atcttgcgtggtcacaaatcttctgtacagagtgttgccgtgcagacttctggagaaatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atcttgcgtggtcacaaatcttctgtacagagtgttgccgtgcagacttctggagaaatg 744
Query: 661 gtttgttccggttcttgggattgcaccatcaacgtttggaaaactagtgacattaatgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gtttgttccggttcttgggattgcaccatcaacgtttggaaaactagtgacattaatgca 804
>gnl|LJGI|TC65900 similar to UniRef100_A7PA93 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 693
Score = 870 bits (439), Expect = 0.0
Identities = 439/439 (100%)
Strand = Plus / Plus
Query: 867 ctcatgggatcattctattaggaaatgggatgttgagacgggcaaaaacttgtcagatat 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcatgggatcattctattaggaaatgggatgttgagacgggcaaaaacttgtcagatat 60
Query: 927 attcagtgggaaagttctcaactgccttgatgttggtggggaaggttctgctctgatagc 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcagtgggaaagttctcaactgccttgatgttggtggggaaggttctgctctgatagc 120
Query: 987 tgctggtggttctgaccctgttattagggtttgggatcctcgtaagccaggcacttctgg 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctggtggttctgaccctgttattagggtttgggatcctcgtaagccaggcacttctgg 180
Query: 1047 tccagttttccagtttgcttctcatacttcttgggtatcatcttgcaagtggcatgataa 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccagttttccagtttgcttctcatacttcttgggtatcatcttgcaagtggcatgataa 240
Query: 1107 ttcttggtttcatttactttctgcatcttatgatgggaaagttatgttatgggatctgag 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcttggtttcatttactttctgcatcttatgatgggaaagttatgttatgggatctgag 300
Query: 1167 aactgcgtggcctctctcagtcattgaatcacacagcgacaaggtactatgtgctgactg 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aactgcgtggcctctctcagtcattgaatcacacagcgacaaggtactatgtgctgactg 360
Query: 1227 gtggaaaggtgacagtgttatcagtggtggagcagactcaaaactttgcatttcttctga 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtggaaaggtgacagtgttatcagtggtggagcagactcaaaactttgcatttcttctga 420
Query: 1287 aattcccgtacagtgacgg 1305
|||||||||||||||||||
Sbjct: 421 aattcccgtacagtgacgg 439
>gnl|LJGI|FS359143 similar to UniRef100_A7PA93 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 684
Score = 200 bits (101), Expect = 2e-50
Identities = 114/117 (97%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 547 aagctcaataccaatgaggctgtcaacactcctacaagggttagggctttcaaaatcttg 606
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 421 aagctcaataccaatgaggctgtcaacactcctacaagggttagg-ctttcaaaatcttg 363
Query: 607 cgtggtcacaaatcttctgtacagagtgttgccgtgcagacttctggagaaatggtt 663
| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 catggtcacaaatctcctgtacagagtgttgccgtgcagacttctggagaaatggtt 306
Score = 121 bits (61), Expect = 1e-26
Identities = 61/61 (100%)
Strand = Plus / Minus
Query: 489 aggtgagcaaactgttactatagctactgcttcgaaagaccggacactaaggctatggaa 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aggtgagcaaactgttactatagctactgcttcgaaagaccggacactaaggctatggaa 501
Query: 549 g 549
|
Sbjct: 500 g 500