Miyakogusa Predicted Gene

Lj2g3v1069370.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1069370.1 Non Chatacterized Hit- tr|B9RYS3|B9RYS3_RICCO
Oligopeptide transporter, putative OS=Ricinus
communis,51.58,4e-19,seg,NULL; ISP4 LIKE PROTEIN,NULL,CUFF.36182.1
         (289 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79796 similar to UniRef100_A7QEZ6 Cluster: Chromosome...   159   1e-38

>gnl|LJGI|TC79796 similar to UniRef100_A7QEZ6 Cluster: Chromosome chr16 scaffold_86,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_86, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 606

 Score =  159 bits (80), Expect = 1e-38
 Identities = 160/190 (84%), Gaps = 15/190 (7%)
 Strand = Plus / Plus

                                                                       
Query: 17  agatgaaaggaagtaagactacagaggaggtgaatagagagcatgaagtagaagaa---- 72
           ||||| ||||||| ||||| |||||||||||||||||||||||||||| |||||||    
Sbjct: 313 agatggaaggaagcaagacgacagaggaggtgaatagagagcatgaagaagaagaagaag 372

                                                                       
Query: 73  -----------gaagagagccctgtgaagcaagtggaacacacagtgccgaaaactgatg 121
                      ||||||||||||||||| |||||||||| ||||||||||||||| ||||
Sbjct: 373 aagaaatagaagaagagagccctgtgaaacaagtggaactcacagtgccgaaaaccgatg 432

                                                                       
Query: 122 actctagtttcgacactcttacattcagaatgtggtttctggggtttgtttcttgtgtgt 181
           || | |||||  ||| |||||||||||||||||||||||||||  |||| ||||||||||
Sbjct: 433 accccagtttgcacattcttacattcagaatgtggtttctgggtgttgtatcttgtgtgt 492

                     
Query: 182 tgctttcctt 191
           ||||||||||
Sbjct: 493 tgctttcctt 502



 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                       
Query: 192 aactgagcctttgtcagtactctcaatttctgtccagattgctgtggttccaattggtca 251
           ||||||||||||| ||||    |||||||||| |||||||||||||||||||||||| ||
Sbjct: 527 aactgagcctttgacagtgacatcaatttctgcccagattgctgtggttccaattggcca 586

                               
Query: 252 tttcatggccaggacattgc 271
           ||||||||| ||||||||||
Sbjct: 587 tttcatggcgaggacattgc 606