Miyakogusa Predicted Gene
- Lj2g3v1069240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1069240.1 Non Chatacterized Hit- tr|D5LXF4|D5LXF4_OLEEU
Putative ubiquitin-protein ligase/zinc ion binding
(Fr,72.22,0.000007,no description,Zinc finger, RING/FYVE/PHD-type;
ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN,,CUFF.36173.1
(803 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78960 similar to UniRef100_A7PN23 Cluster: Chromosome... 1086 0.0
gnl|LJGI|TC70905 similar to UniRef100_Q75I59 Cluster: Expressed ... 325 2e-88
gnl|LJGI|TC64151 similar to UniRef100_A7PN23 Cluster: Chromosome... 272 3e-72
gnl|LJGI|TC73642 similar to UniRef100_A7PN23 Cluster: Chromosome... 72 6e-12
>gnl|LJGI|TC78960 similar to UniRef100_A7PN23 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 612
Score = 1086 bits (548), Expect = 0.0
Identities = 551/552 (99%)
Strand = Plus / Plus
Query: 1 atgtggaactttgcatcaaactgcattgctggaaatgtggaactgaaaaatgattcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtggaactttgcatcaaactgcattgctggaaatgtggaactgaaaaatgattcttca 120
Query: 61 aagctaactcattctggttcggaatgttctgatgacgagacttctgttgtgggcagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagctaactcattctggttcggaatgttctgatgacgagacttctgttgtgggcagagag 180
Query: 121 gaaggactggaatgcccggtatgctgggaatctttcaatattgtggaaaatgtaccctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaggactggaatgcccggtatgctgggaatctttcaatattgtggaaaatgtaccctat 240
Query: 181 gttttatggtgtggccataccctttgtaaaaattgtatcctcggattgcaatgggctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttttatggtgtggccataccctttgtaaaaattgtatcctcggattgcaatgggctgtt 300
Query: 241 gtgaagtttccgacgttgccagttcaacttccgctttttatctcctgcccatggtgcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgaagtttccgacgttgccagttcaacttccgctttttatctcctgcccatggtgcaac 360
Query: 301 cttttatcctttcgtttagtttatcggggaaatcttaagttccctcgcaagaactacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttttatcctttcgtttagtttatcggggaaatcttaagttccctcgcaagaactacttc 420
Query: 361 cttctttggatggttgagagcatgaatggcgatagagtaaaatcacattcaactttctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttctttggatggttgagagcatgaatggcgatagagtaaaatcacattcaactttctgt 480
Query: 421 ggggataatcaacaaaactggccaatcaaagacaactcaaccacaggaagccaggtatac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 481 ggggataatcaacaaaactggccaatcaaagacaactcaaccacaggaagccacgtatac 540
Query: 481 aatggtagccttcggagggggcaagttcgccagccagagacacataattccattcagtat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatggtagccttcggagggggcaagttcgccagccagagacacataattccattcagtat 600
Query: 541 catggtcatact 552
||||||||||||
Sbjct: 601 catggtcatact 612
>gnl|LJGI|TC70905 similar to UniRef100_Q75I59 Cluster: Expressed protein; n=1; Oryza
sativa Japonica Group|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice), partial (19%)
Length = 558
Score = 325 bits (164), Expect = 2e-88
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 640 gtcatcatatttcttttgattattttgtatgcaataccagccagtgcagtcattttggct 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcatcatatttcttttgattattttgtatgcaataccagccagtgcagtcattttggct 60
Query: 700 ctgtatatactcattacaattctgtttgctctcccatcatttctcatcttgtacttctca 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtatatactcattacaattctgtttgctctcccatcatttctcatcttgtacttctca 120
Query: 760 tatcctagtttggattggcttgtcagggaaatcatcacctgaca 803
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatcctagtttggattggcttgtcagggaaatcatcacctgaca 164
>gnl|LJGI|TC64151 similar to UniRef100_A7PN23 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (94%)
Length = 1070
Score = 272 bits (137), Expect = 3e-72
Identities = 359/433 (82%)
Strand = Plus / Plus
Query: 1 atgtggaactttgcatcaaactgcattgctggaaatgtggaactgaaaaatgattcttca 60
|||||||||||||| |||| |||||| |||||| ||| | ||||||||||||| | |
Sbjct: 207 atgtggaactttgcgtcaagttgcatttctggaagtgtaggtctgaaaaatgattgtcta 266
Query: 61 aagctaactcattctggttcggaatgttctgatgacgagacttctgttgtgggcagagag 120
|||| |||||| || | ||| ||||| ||||| || ||||||||| | | ||| |||
Sbjct: 267 aagccaactcactccgcttcagaatgctctgacgatgagacttctatgacgaccagggag 326
Query: 121 gaaggactggaatgcccggtatgctgggaatctttcaatattgtggaaaatgtaccctat 180
||||| || |||||||| |||||||||||||||| | ||||| ||||| || || ||
Sbjct: 327 gaagggctagaatgcccaatatgctgggaatcttttgacattgttgaaaacgttccttac 386
Query: 181 gttttatggtgtggccataccctttgtaaaaattgtatcctcggattgcaatgggctgtt 240
||||||||||||||||| ||||| ||||||||||| ||||| ||| ||||||||||| |
Sbjct: 387 gttttatggtgtggccacaccctctgtaaaaattgcatcctgggactgcaatgggctatg 446
Query: 241 gtgaagtttccgacgttgccagttcaacttccgctttttatctcctgcccatggtgcaac 300
||||| || || || | ||| |||| ||||| ||||||||||||||||| |||||||||
Sbjct: 447 gtgaaattcccaactcttccaattcagcttccactttttatctcctgcccctggtgcaac 506
Query: 301 cttttatcctttcgtttagtttatcggggaaatcttaagttccctcgcaagaactacttc 360
||||||| || ||||||||| ||| ||||||| | || ||||||||||||||||| ||
Sbjct: 507 attttatctttccgtttagttcatcagggaaatttgaaattccctcgcaagaactatttt 566
Query: 361 cttctttggatggttgagagcatgaatggcgatagagtaaaatcacattcaactttctgt 420
||||||||||||||||||||||||||||| || |||| || ||||||||||| ||||
Sbjct: 567 cttctttggatggttgagagcatgaatggtgacagagcaacgccacattcaactcgctgt 626
Query: 421 ggggataatcaac 433
|||||| ||||||
Sbjct: 627 ggggatgatcaac 639
Score = 240 bits (121), Expect = 1e-62
Identities = 208/237 (87%)
Strand = Plus / Plus
Query: 560 acctcagtatgcaaagattgcatatttctctgcgaaagtcactgattttctttgtccagt 619
||||||| ||| ||||| |||||| ||||||||| ||||||||| |||| ||||| || |
Sbjct: 766 acctcagaatggaaagactgcatacttctctgcggaagtcactggttttgtttgttcact 825
Query: 620 taacagctaagtttccattggtcatcatatttcttttgattattttgtatgcaataccag 679
| ||||| ||||| |||||| |||| ||||||||||||||| | || ||||||||||| |
Sbjct: 826 tgacagcaaagttcccattgatcattatatttcttttgattgtgttatatgcaatacctg 885
Query: 680 ccagtgcagtcattttggctctgtatatactcattacaattctgtttgctctcccatcat 739
||||||||| ||||||||| ||||||||| | ||||| ||||| ||||||||||||||||
Sbjct: 886 ccagtgcagccattttggcactgtatatagttattactattctctttgctctcccatcat 945
Query: 740 ttctcatcttgtacttctcatatcctagtttggattggcttgtcagggaaatcatca 796
|||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||
Sbjct: 946 ttctcatcttgtactttgcatatcctagtttggattggcttgtccgagaaattatca 1002
>gnl|LJGI|TC73642 similar to UniRef100_A7PN23 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 880
Score = 71.9 bits (36), Expect = 6e-12
Identities = 93/112 (83%)
Strand = Plus / Plus
Query: 140 tatgctgggaatctttcaatattgtggaaaatgtaccctatgttttatggtgtggccata 199
||||||||||||||||||| ||||| || ||||| || ||||| || ||||| ||||| |
Sbjct: 577 tatgctgggaatctttcaacattgttgagaatgtgccttatgtgttgtggtgcggccaca 636
Query: 200 ccctttgtaaaaattgtatcctcggattgcaatgggctgttgtgaagtttcc 251
|| | |||||||||||| |||| ||| | || |||||| | ||||| |||||
Sbjct: 637 ccttgtgtaaaaattgtgtccttggacttcagtgggctatggtgaaatttcc 688
Score = 67.9 bits (34), Expect = 9e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 343 cctcgcaagaactacttccttctttggatggttgagag 380
||||| ||||||||||||||||||||||||||||||||
Sbjct: 780 cctcgtaagaactacttccttctttggatggttgagag 817