Miyakogusa Predicted Gene
- Lj2g3v1068920.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1068920.1 tr|B9IK24|B9IK24_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_577693 PE=4
SV=1,54.55,4e-18,seg,NULL; DUF3598,Domain of unknown function DUF3598;
no description,Calycin,CUFF.36146.1
(1170 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67167 similar to UniRef100_A7PN11 Cluster: Chromosome... 2303 0.0
gnl|LJGI|TC70651 similar to UniRef100_A7PN11 Cluster: Chromosome... 833 0.0
gnl|LJGI|AV771945 weakly similar to UniRef100_A5E0D8 Cluster: Pr... 94 2e-18
>gnl|LJGI|TC67167 similar to UniRef100_A7PN11 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 1211
Score = 2303 bits (1162), Expect = 0.0
Identities = 1168/1170 (99%)
Strand = Plus / Plus
Query: 1 atggcttcctttcactgctcactctcactctcacttccctcactccccaaactctccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 atggcttcctttcactgctcactctcactctcacttccctcactccccaaactctccacc 80
Query: 61 accgttcgcttcttttcatcatccacccaaacctcaagaatccgagcctcatcatcctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 accgttcgcttcttttcatcatccacccaaacctcaagaatccgagcctcatcatcctcc 140
Query: 121 acctcaacactcgaagaagatgcagccgccatgagcatcgacaacctccgccgcttcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 acctcaacactcgaagaagatgcagccgccatgagcatcgacaacctccgccgcttcatc 200
Query: 181 aaccttaacaagggaaagtggaatggctctttctatcaatttgattctcgtgggaatatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaccttaacaagggaaagtggaatggctctttctatcaatttgattctcgtgggaatatg 260
Query: 241 ttgcagcaagtgaccaccaagctttcagctagctcttatggtgaagatgaactcatgagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgcagcaagtgaccaccaagctttcagctagctcttatggtgaagatgaactcatgagt 320
Query: 301 ctcattcaaacgctgtatattaaacaaccttcatcaagcacttcaacttctggagatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcattcaaacgctgtatattaaacaaccttcatcaagcacttcaacttctggagatgat 380
Query: 361 gatagtgatgatgaatgggcggagtacaaaattaaagaaaccaatatgtttacggttgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatagtgatgatgaatgggcggagtacaaaattaaagaaaccaatatgtttacggttgac 440
Query: 421 aaatatcaacaaataggcttttttccatctgaaagagcatttgcactgaggtaccaaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatatcaacaaataggcttttttccatctgaaagagcatttgcactgaggtaccaaaca 500
Query: 481 gctggtatgttggatacagtattaaggcaaggggttcttggagaagatgacactggtgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctggtatgttggatacagtattaaggcaaggggttcttggagaagatgacactggtgaa 560
Query: 541 gaatcacctagaaatcttaagcttccctctcgtcgaccatctattgtatgtgagaattgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaatcacctagaaatcttaagcttccctctcgtcgaccatctattgtatgtgagaattgc 620
Query: 601 ctgtactctctacagagagatatgcgagcaagagcctttcacattttggagccaaaaggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgtactctctacagagagatatgcgagcaagagcctttcacattttggagccaaaaggc 680
Query: 661 actgtagatatgcttctcctctttctagaggaaagaactgacgggtctcatcctctactt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actgtagatatgcttctcctctttctagaggaaagaactgacgggtctcatcctctactt 740
Query: 721 gaaagttctggggacatgaaaagtaggattacaccttttattggtaaatggaaaggtcat 780
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaaagttctggggacatgaagagtaggattacaccttttattggtaaatggaaaggtcat 800
Query: 781 tccatgacaaaacgaagtggggtttatggatctacaattgctgaagctgatacagttgtg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tccatgacaaaacgaagtggggtttatggatctacaattgctgaagctgatacagttgtg 860
Query: 841 ttacatgagatggatagcaacgggcaacttattcaggatgttacttctacatctcatggg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ttacatgagatggatagcaacgggcaacttattcaggatgttacttctacatctcatggg 920
Query: 901 gaaaatgttactactaccaacgtgcattggactggcgcaatatctgaaaatttggtcaca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 gaaaatgttactactaccaacgtgcattggactggcgcaatatctgaaaatttggtcaca 980
Query: 961 tttgatggtggttatcagatgatacttttacctggtggcatgtatatgggatgtccttat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 tttgatggtggttatcagatgatacttttacctggtggcatgtatatgggatgtccttat 1040
Query: 1021 gatgtagcaaaaagtgtagcacagtcaaaatctttccatttagagttctgttggttggag 1080
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 gatgtagcaaaaagtgcagcacagtcaaaatctttccatttagagttctgttggttggag 1100
Query: 1081 acacctgataagaggcaaagactagttcgcacatatgacgttgaaggcttggctgtttca 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 acacctgataagaggcaaagactagttcgcacatatgacgttgaaggcttggctgtttca 1160
Query: 1141 tctacttattttcttgagactagattgtaa 1170
||||||||||||||||||||||||||||||
Sbjct: 1161 tctacttattttcttgagactagattgtaa 1190
>gnl|LJGI|TC70651 similar to UniRef100_A7PN11 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 618
Score = 833 bits (420), Expect = 0.0
Identities = 429/432 (99%)
Strand = Plus / Plus
Query: 739 aaaagtaggattacaccttttattggtaaatggaaaggtcattccatgacaaaacgaagt 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaagtaggattacaccttttattggtaaatggaaaggtcattccatgacaaaacgaagt 60
Query: 799 ggggtttatggatctacaattgctgaagctgatacagttgtgttacatgagatggatagc 858
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggggtttatggatctaccattgctgaagctgatacagttgtgttacatgagatggatagc 120
Query: 859 aacgggcaacttattcaggatgttacttctacatctcatggggaaaatgttactactacc 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacgggcaacttattcaggatgttacttctacatctcatggggaaaatgttactactacc 180
Query: 919 aacgtgcattggactggcgcaatatctgaaaatttggtcacatttgatggtggttatcag 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacgtgcattggactggcgcaatatctgaaaatttggtcacatttgatggtggttatcag 240
Query: 979 atgatacttttacctggtggcatgtatatgggatgtccttatgatgtagcaaaaagtgta 1038
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 241 atgatacttttacctggtggcatgtatatgggatgtccttatgatgtagccaaaagtgta 300
Query: 1039 gcacagtcaaaatctttccatttagagttctgttggttggagacacctgataagaggcaa 1098
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 301 gcacagtcaaaatctttccatttagagttctgttggttggagacacctgataagaggcca 360
Query: 1099 agactagttcgcacatatgacgttgaaggcttggctgtttcatctacttattttcttgag 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agactagttcgcacatatgacgttgaaggcttggctgtttcatctacttattttcttgag 420
Query: 1159 actagattgtaa 1170
||||||||||||
Sbjct: 421 actagattgtaa 432
>gnl|LJGI|AV771945 weakly similar to UniRef100_A5E0D8 Cluster: Predicted protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Predicted
protein - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus), partial (8%)
Length = 386
Score = 93.7 bits (47), Expect = 2e-18
Identities = 54/55 (98%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 1117 gacgttgaaggcttggctgtttcatctactta-ttttcttgagactagattgtaa 1170
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 170 gacgttgaaggcttggctgtttcatctacttatttttcttgagactagattgtaa 116