Miyakogusa Predicted Gene

Lj2g3v1068780.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1068780.1 CUFF.36127.1
         (837 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BI419436 similar to UniRef100_A7PDH8 Cluster: Chromosom...   100   3e-20
gnl|LJGI|FS332742 homologue to UniRef100_A7P1N5 Cluster: Chromos...    56   4e-07

>gnl|LJGI|BI419436 similar to UniRef100_A7PDH8 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 601

 Score = 99.6 bits (50), Expect = 3e-20
 Identities = 116/138 (84%)
 Strand = Plus / Plus

                                                                       
Query: 472 gtggatctgtggagtgtgggttgtgtatttgcagaactttttcttgggaagcctatcctt 531
           |||||||| |||||||| || ||||| |||||||| ||  || ||||||||||| | |||
Sbjct: 154 gtggatctttggagtgttggctgtgtgtttgcagagctacttgttgggaagcctgtactt 213

                                                                       
Query: 532 aaagggagaactgaggttgaacaattgcacaaagtatttaagctgtgtggttctccatct 591
            | |||||||||||||||||||||||||||||| | || || || ||||| || ||| ||
Sbjct: 214 caggggagaactgaggttgaacaattgcacaaaattttcaaactttgtggctccccacct 273

                             
Query: 592 gatgagtactggaaaaag 609
           || || ||||||||||||
Sbjct: 274 gaggattactggaaaaag 291


>gnl|LJGI|FS332742 homologue to UniRef100_A7P1N5 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 743

 Score = 56.0 bits (28), Expect = 4e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 149 tataccttgtatttgaatacatggagcatgat 180
           |||||||||| |||||||||||||||||||||
Sbjct: 389 tataccttgtttttgaatacatggagcatgat 420