Miyakogusa Predicted Gene
- Lj2g3v1068710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1068710.1 Non Chatacterized Hit- tr|F6Z6E4|F6Z6E4_CIOIN
Uncharacterized protein OS=Ciona intestinalis
GN=Cin.3,32.12,2e-18,t-snare proteins,t-SNARE; SNARE PROTEIN,
PUTATIVE,NULL; VESICLE TRANSPORT V-SNARE PROTEIN
VTI1-RELAT,CUFF.36190.1
(525 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65213 similar to UniRef100_A2Q3R8 Cluster: Vesicle tr... 1041 0.0
gnl|LJGI|TC75290 similar to UniRef100_A7PDI5 Cluster: Chromosome... 82 4e-15
>gnl|LJGI|TC65213 similar to UniRef100_A2Q3R8 Cluster: Vesicle transport v-SNARE;
t-snare; n=1; Medicago truncatula|Rep: Vesicle transport
v-SNARE; t-snare - Medicago truncatula (Barrel medic),
complete
Length = 1137
Score = 1041 bits (525), Expect = 0.0
Identities = 525/525 (100%)
Strand = Plus / Plus
Query: 1 atgagcaacgtgttcgagggatacgaacgccagtactgcgagctttcggcgaatctatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atgagcaacgtgttcgagggatacgaacgccagtactgcgagctttcggcgaatctatcg 219
Query: 61 aagaaatgcactgcagctggttctcttaatggagagcaaaagaagcaaaaagtttctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aagaaatgcactgcagctggttctcttaatggagagcaaaagaagcaaaaagtttctgaa 279
Query: 121 ataaaggctggaattgatgaagcagaagctttgattcgcaaaatggatcttgaggcaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ataaaggctggaattgatgaagcagaagctttgattcgcaaaatggatcttgaggcaaga 339
Query: 181 agtttgcagccaaatgtcagggctgtgcttcttgctaagttgcgggagtataagtcagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 agtttgcagccaaatgtcagggctgtgcttcttgctaagttgcgggagtataagtcagat 399
Query: 241 ctaaacaatcttaaaagtgaggttaagaaaattgtatctggtaatctaaacccatctgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ctaaacaatcttaaaagtgaggttaagaaaattgtatctggtaatctaaacccatctgca 459
Query: 301 cgggatgagttgttggaatcaggcatggcagatactttgacggcatcatctgatcagagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cgggatgagttgttggaatcaggcatggcagatactttgacggcatcatctgatcagagg 519
Query: 361 tcaagattaatgatgtcaactgacaggttgaacaagacaggtgatagagttcagcaaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tcaagattaatgatgtcaactgacaggttgaacaagacaggtgatagagttcagcaaagc 579
Query: 421 aggaaaacaatgttggaaacagaagagctcggtgtttcgattcttcaagatttgcattca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aggaaaacaatgttggaaacagaagagctcggtgtttcgattcttcaagatttgcattca 639
Query: 481 cagcgacaatctctgttgcatgctcatacaacgcttcatggagta 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cagcgacaatctctgttgcatgctcatacaacgcttcatggagta 684
>gnl|LJGI|TC75290 similar to UniRef100_A7PDI5 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 450
Score = 81.8 bits (41), Expect = 4e-15
Identities = 107/129 (82%)
Strand = Plus / Plus
Query: 65 aatgcactgcagctggttctcttaatggagagcaaaagaagcaaaaagtttctgaaataa 124
|||||||||||||| | ||||| ||||||| || |||||||| ||| ||||||||||||
Sbjct: 163 aatgcactgcagcttctgctcttgatggagaacagaagaagcagaaactttctgaaataa 222
Query: 125 aggctggaattgatgaagcagaagctttgattcgcaaaatggatcttgaggcaagaagtt 184
| ||||| | || || || || || ||| |||| |||||||| |||||||| || ||||
Sbjct: 223 aagctgggttagacgatgctgatgcattggttcggaaaatggaccttgaggctaggagtt 282
Query: 185 tgcagccaa 193
|||||||||
Sbjct: 283 tgcagccaa 291